(31 nodes) Phagocytic vesicle membrane network (Poecilia mexicana)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	vamp7	Synaptobrevin-like 1; Belongs to the synaptobrevin family. (220 aa)
	lamp2	Lysosomal-associated membrane protein 2. (420 aa)
	RAB38	RAB38, member RAS oncogene family. (212 aa)
	inpp5b	Inositol polyphosphate-5-phosphatase B. (845 aa)
	ENSPMEP00000027804	Uncharacterized protein. (114 aa)
	ENSPMEP00000026479	Uncharacterized protein. (217 aa)
	LOC106926937	Zgc:162171. (227 aa)
	rab7a	RAB7a, member RAS oncogene family. (207 aa)
	ENSPMEP00000021761	Uncharacterized protein. (84 aa)
	ocrl	OCRL inositol polyphosphate-5-phosphatase. (877 aa)
	pip4p1	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (270 aa)
	RAB9A	RAB9A, member RAS oncogene family. (202 aa)
	LOC106929788	Uncharacterized protein. (207 aa)
	pip4p2	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (257 aa)
	ENSPMEP00000017139	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (122 aa)
	LOC106914102	RAB38b, member of RAS oncogene family. (218 aa)
	pikfyve	Phosphoinositide kinase, FYVE finger containing. (2073 aa)
	LOC106926099	Synaptotagmin VIIb. (511 aa)
	ENSPMEP00000011629	RAB9B, member RAS oncogene family. (222 aa)
	lamp1	Lysosomal associated membrane protein 1a. (418 aa)
	rab32	RAB32a, member RAS oncogene family. (213 aa)
	RAB31	RAB31, member RAS oncogene family. (194 aa)
	LOC106920307	Toll-like receptor 1. (802 aa)
	LOC106920377	Toll-like receptor 18. (874 aa)
	tlr2-2	TIR domain-containing protein. (816 aa)
	tlr2	Toll-like receptor 2; Belongs to the Toll-like receptor family. (812 aa)
	LOC106917143	RAB38c, member of RAS oncogene family. (207 aa)
	rilp	Rab interacting lysosomal protein. (437 aa)
	rab22a	RAB22A, member RAS oncogene family. (194 aa)
	LOC106914598	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (260 aa)
	ENSPMEP00000000069	RAB9B, member RAS oncogene family. (222 aa)

Your Current Organism:

Poecilia mexicana

NCBI taxonomy Id: 48701
Other names: shortfin molly

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPMEP00000000069	ENSPMEP00000026479	ENSPMEP00000000069	ENSPMEP00000026479	RAB9B, member RAS oncogene family.	Uncharacterized protein.	0.899
ENSPMEP00000000069	LOC106929788	ENSPMEP00000000069	ENSPMEP00000018677	RAB9B, member RAS oncogene family.	Uncharacterized protein.	0.433
ENSPMEP00000000069	RAB31	ENSPMEP00000000069	ENSPMEP00000008429	RAB9B, member RAS oncogene family.	RAB31, member RAS oncogene family.	0.632
ENSPMEP00000000069	RAB9A	ENSPMEP00000000069	ENSPMEP00000020581	RAB9B, member RAS oncogene family.	RAB9A, member RAS oncogene family.	0.899
ENSPMEP00000000069	rab22a	ENSPMEP00000000069	ENSPMEP00000002681	RAB9B, member RAS oncogene family.	RAB22A, member RAS oncogene family.	0.631
ENSPMEP00000000069	rab7a	ENSPMEP00000000069	ENSPMEP00000023061	RAB9B, member RAS oncogene family.	RAB7a, member RAS oncogene family.	0.433
ENSPMEP00000000069	rilp	ENSPMEP00000000069	ENSPMEP00000002992	RAB9B, member RAS oncogene family.	Rab interacting lysosomal protein.	0.547
ENSPMEP00000011629	ENSPMEP00000026479	ENSPMEP00000011629	ENSPMEP00000026479	RAB9B, member RAS oncogene family.	Uncharacterized protein.	0.899
ENSPMEP00000011629	LOC106929788	ENSPMEP00000011629	ENSPMEP00000018677	RAB9B, member RAS oncogene family.	Uncharacterized protein.	0.433
ENSPMEP00000011629	RAB31	ENSPMEP00000011629	ENSPMEP00000008429	RAB9B, member RAS oncogene family.	RAB31, member RAS oncogene family.	0.632
ENSPMEP00000011629	RAB9A	ENSPMEP00000011629	ENSPMEP00000020581	RAB9B, member RAS oncogene family.	RAB9A, member RAS oncogene family.	0.899
ENSPMEP00000011629	rab22a	ENSPMEP00000011629	ENSPMEP00000002681	RAB9B, member RAS oncogene family.	RAB22A, member RAS oncogene family.	0.631
ENSPMEP00000011629	rab7a	ENSPMEP00000011629	ENSPMEP00000023061	RAB9B, member RAS oncogene family.	RAB7a, member RAS oncogene family.	0.433
ENSPMEP00000011629	rilp	ENSPMEP00000011629	ENSPMEP00000002992	RAB9B, member RAS oncogene family.	Rab interacting lysosomal protein.	0.547
ENSPMEP00000017139	LOC106914598	ENSPMEP00000017139	ENSPMEP00000000416	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	0.900
ENSPMEP00000017139	pikfyve	ENSPMEP00000017139	ENSPMEP00000014313	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	Phosphoinositide kinase, FYVE finger containing.	0.900
ENSPMEP00000017139	pip4p2	ENSPMEP00000017139	ENSPMEP00000018572	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	0.887
ENSPMEP00000021761	vamp7	ENSPMEP00000021761	ENSPMEP00000003496	Uncharacterized protein.	Synaptobrevin-like 1; Belongs to the synaptobrevin family.	0.587
ENSPMEP00000026479	ENSPMEP00000000069	ENSPMEP00000026479	ENSPMEP00000000069	Uncharacterized protein.	RAB9B, member RAS oncogene family.	0.899
ENSPMEP00000026479	ENSPMEP00000011629	ENSPMEP00000026479	ENSPMEP00000011629	Uncharacterized protein.	RAB9B, member RAS oncogene family.	0.899