STRINGSTRING
UBE3A UBE3A LOC106927666 LOC106927666 ubr5 ubr5 SRC SRC phb phb LOC106932837 LOC106932837
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
UBE3AUbiquitin-protein ligase E3A; E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and transfers it to its substrates. (895 aa)
LOC106927666Tyrosine-protein kinase. (543 aa)
ubr5Ubiquitin protein ligase E3 component n-recognin 5. (2401 aa)
SRCTyrosine-protein kinase. (550 aa)
phbProhibitin. (271 aa)
LOC106932837Uncharacterized protein. (803 aa)
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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