(13 nodes) Negative regulation of miRNA-mediated gene silencing network (Poecilia mexicana)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	bcdin3d	BCDIN3 domain containing. (279 aa)
	ELAVL1	ELAV-like protein; Belongs to the RRM elav family. (360 aa)
	lin28b	Lin-28 homolog B (C. elegans). (270 aa)
	ENSPMEP00000030787	GPS2_interact domain-containing protein. (223 aa)
	elavl1	ELAV-like protein; Belongs to the RRM elav family. (348 aa)
	dazl	Deleted in azoospermia-like. (217 aa)
	LOC106910308	Si:dkey-206d17.12. (556 aa)
	LOC106906194	Zinc finger CCCH-type containing 12A. (627 aa)
	LOC106919386	Nuclear receptor corepressor 1. (1258 aa)
	zmpste24	CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (471 aa)
	ncor2	Nuclear receptor corepressor 2. (2274 aa)
	LOC106910880	DND microRNA-mediated repression inhibitor 1. (469 aa)
	zc3h10	Zinc finger CCCH-type containing 10. (549 aa)

Your Current Organism:

Poecilia mexicana

NCBI taxonomy Id: 48701
Other names: shortfin molly

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPMEP00000030787	LOC106919386	ENSPMEP00000030787	ENSPMEP00000013975	GPS2_interact domain-containing protein.	Nuclear receptor corepressor 1.	0.937
LOC106910880	dazl	ENSPMEP00000017357	ENSPMEP00000008642	DND microRNA-mediated repression inhibitor 1.	Deleted in azoospermia-like.	0.778
LOC106910880	lin28b	ENSPMEP00000017357	ENSPMEP00000029738	DND microRNA-mediated repression inhibitor 1.	Lin-28 homolog B (C. elegans).	0.460
LOC106919386	ENSPMEP00000030787	ENSPMEP00000013975	ENSPMEP00000030787	Nuclear receptor corepressor 1.	GPS2_interact domain-containing protein.	0.937
bcdin3d	zc3h10	ENSPMEP00000022703	ENSPMEP00000022033	BCDIN3 domain containing.	Zinc finger CCCH-type containing 10.	0.579
dazl	LOC106910880	ENSPMEP00000008642	ENSPMEP00000017357	Deleted in azoospermia-like.	DND microRNA-mediated repression inhibitor 1.	0.778
dazl	lin28b	ENSPMEP00000008642	ENSPMEP00000029738	Deleted in azoospermia-like.	Lin-28 homolog B (C. elegans).	0.519
lin28b	LOC106910880	ENSPMEP00000029738	ENSPMEP00000017357	Lin-28 homolog B (C. elegans).	DND microRNA-mediated repression inhibitor 1.	0.460
lin28b	dazl	ENSPMEP00000029738	ENSPMEP00000008642	Lin-28 homolog B (C. elegans).	Deleted in azoospermia-like.	0.519
zc3h10	bcdin3d	ENSPMEP00000022033	ENSPMEP00000022703	Zinc finger CCCH-type containing 10.	BCDIN3 domain containing.	0.579