30 items (Poecilia mexicana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	crbn	Cereblon. (445 aa)
	cul4b	Cullin 4B; Belongs to the cullin family. (868 aa)
	dcaf4	WD repeat domain 21. (515 aa)
	dcaf11	Ddb1 and cul4 associated factor 11. (497 aa)
	DDA1	DET1 and DDB1 associated 1. (102 aa)
	dcaf12	DDB1 and CUL4 associated factor 12. (483 aa)
	ercc8	Excision repair cross-complementation group 8. (401 aa)
	DCAF7	DDB1 and CUL4 associated factor 7. (342 aa)
	LOC106925176	Ddb1 and cul4 associated factor 6. (487 aa)
	DCAF1	DDB1 and CUL4 associated factor 1. (1356 aa)
	ddb2	Damage-specific DNA binding protein 2. (492 aa)
	glmn	Glomulin, FKBP associated protein a. (611 aa)
	rbx1	Ring-box 1, E3 ubiquitin protein ligase. (108 aa)
	dcaf10	WD repeat domain 32. (527 aa)
	trpc4ap	Transient receptor potential cation channel, subfamily C, member 4 associated protein a. (774 aa)
	fbxw5	F-box and WD repeat domain containing 5. (630 aa)
	dcaf5	Ddb1 and cul4 associated factor 5. (782 aa)
	LOC106928633	LisH domain-containing protein. (1570 aa)
	LOC106907893	DET1 and DDB1 associated 1. (102 aa)
	cul4a	Cullin 4A; Belongs to the cullin family. (646 aa)
	dcaf8	DDB1 and CUL4 associated factor 8. (618 aa)
	ddb1	Damage-specific DNA binding protein 1. (1139 aa)
	wdtc1	WD and tetratricopeptide repeats 1. (664 aa)
	dtl	Denticleless E3 ubiquitin protein ligase homolog (Drosophila). (651 aa)
	ambra1	Autophagy/beclin-1 regulator 1b. (1201 aa)
	LOC106930164	Ddb1 and cul4 associated factor 6. (426 aa)
	det1	DET1 partner of COP1 E3 ubiquitin ligase. (551 aa)
	dcaf17	Ddb1 and cul4 associated factor 17. (507 aa)
	dcaf13	Ddb1 and cul4 associated factor 13. (458 aa)
	cop1	COP1 E3 ubiquitin ligase. (696 aa)

Your Current Organism:

Poecilia mexicana

NCBI taxonomy Id: 48701
Other names: shortfin molly

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DCAF1	DDA1	ENSPMEP00000018494	ENSPMEP00000029578	DDB1 and CUL4 associated factor 1.	DET1 and DDB1 associated 1.	0.663
DCAF1	LOC106907893	ENSPMEP00000018494	ENSPMEP00000011749	DDB1 and CUL4 associated factor 1.	DET1 and DDB1 associated 1.	0.663
DCAF1	cul4a	ENSPMEP00000018494	ENSPMEP00000011144	DDB1 and CUL4 associated factor 1.	Cullin 4A; Belongs to the cullin family.	0.956
DCAF1	cul4b	ENSPMEP00000018494	ENSPMEP00000034470	DDB1 and CUL4 associated factor 1.	Cullin 4B; Belongs to the cullin family.	0.956
DCAF1	ddb1	ENSPMEP00000018494	ENSPMEP00000009441	DDB1 and CUL4 associated factor 1.	Damage-specific DNA binding protein 1.	0.981
DCAF1	dtl	ENSPMEP00000018494	ENSPMEP00000007240	DDB1 and CUL4 associated factor 1.	Denticleless E3 ubiquitin protein ligase homolog (Drosophila).	0.495
DCAF1	rbx1	ENSPMEP00000018494	ENSPMEP00000015315	DDB1 and CUL4 associated factor 1.	Ring-box 1, E3 ubiquitin protein ligase.	0.919
DCAF7	DDA1	ENSPMEP00000023863	ENSPMEP00000029578	DDB1 and CUL4 associated factor 7.	DET1 and DDB1 associated 1.	0.717
DCAF7	LOC106907893	ENSPMEP00000023863	ENSPMEP00000011749	DDB1 and CUL4 associated factor 7.	DET1 and DDB1 associated 1.	0.717
DCAF7	ambra1	ENSPMEP00000023863	ENSPMEP00000006530	DDB1 and CUL4 associated factor 7.	Autophagy/beclin-1 regulator 1b.	0.444
DCAF7	cul4a	ENSPMEP00000023863	ENSPMEP00000011144	DDB1 and CUL4 associated factor 7.	Cullin 4A; Belongs to the cullin family.	0.846
DCAF7	cul4b	ENSPMEP00000023863	ENSPMEP00000034470	DDB1 and CUL4 associated factor 7.	Cullin 4B; Belongs to the cullin family.	0.846
DCAF7	dcaf10	ENSPMEP00000023863	ENSPMEP00000015150	DDB1 and CUL4 associated factor 7.	WD repeat domain 32.	0.690
DCAF7	dcaf11	ENSPMEP00000023863	ENSPMEP00000032785	DDB1 and CUL4 associated factor 7.	Ddb1 and cul4 associated factor 11.	0.757
DCAF7	dcaf4	ENSPMEP00000023863	ENSPMEP00000033189	DDB1 and CUL4 associated factor 7.	WD repeat domain 21.	0.686
DCAF7	ddb1	ENSPMEP00000023863	ENSPMEP00000009441	DDB1 and CUL4 associated factor 7.	Damage-specific DNA binding protein 1.	0.925
DCAF7	ddb2	ENSPMEP00000023863	ENSPMEP00000018231	DDB1 and CUL4 associated factor 7.	Damage-specific DNA binding protein 2.	0.644
DCAF7	dtl	ENSPMEP00000023863	ENSPMEP00000007240	DDB1 and CUL4 associated factor 7.	Denticleless E3 ubiquitin protein ligase homolog (Drosophila).	0.824
DCAF7	ercc8	ENSPMEP00000023863	ENSPMEP00000025615	DDB1 and CUL4 associated factor 7.	Excision repair cross-complementation group 8.	0.845
DCAF7	rbx1	ENSPMEP00000023863	ENSPMEP00000015315	DDB1 and CUL4 associated factor 7.	Ring-box 1, E3 ubiquitin protein ligase.	0.705