24 items (Poecilia mexicana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSPMEP00000025333	Sema domain-containing protein. (598 aa)
	ENSPMEP00000000668	Plexin_cytopl domain-containing protein. (161 aa)
	LOC106908941	Plexin C1. (594 aa)
	LOC106928996	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb; Belongs to the semaphorin family. (764 aa)
	plxnb1	Plexin b1b. (2193 aa)
	ENSPMEP00000003807	Plexin_cytopl domain-containing protein. (47 aa)
	LOC106920493	Plexin A2. (1822 aa)
	LOC106912208	Plexin A3. (1138 aa)
	ENSPMEP00000007324	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa; Belongs to the semaphorin family. (692 aa)
	LOC106928804	Endothelin receptor type Ab; Belongs to the G-protein coupled receptor 1 family. (469 aa)
	ENSPMEP00000010756	Sema domain-containing protein. (442 aa)
	ENSPMEP00000011819	Plexin_cytopl domain-containing protein. (54 aa)
	ENSPMEP00000011832	Uncharacterized protein. (383 aa)
	LOC106925465	Endothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family. (444 aa)
	LOC106915444	Plexin b1a. (2162 aa)
	ENSPMEP00000018443	Sema domain-containing protein. (443 aa)
	LOC106907692	Plexin_cytopl domain-containing protein. (74 aa)
	PLXNA2	Plexin A2. (1882 aa)
	ENSPMEP00000022795	Sema domain-containing protein. (393 aa)
	plxna1	Sema domain-containing protein. (1948 aa)
	LOC106922715	Sema domain-containing protein. (1783 aa)
	plxnb2	Plexin b2b. (1848 aa)
	plxna4	Plexin A4. (1375 aa)
	edn1	Endothelin 1. (207 aa)

Your Current Organism:

Poecilia mexicana

NCBI taxonomy Id: 48701
Other names: shortfin molly

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPMEP00000000668	ENSPMEP00000007324	ENSPMEP00000000668	ENSPMEP00000007324	Plexin_cytopl domain-containing protein.	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa; Belongs to the semaphorin family.	0.481
ENSPMEP00000000668	ENSPMEP00000010756	ENSPMEP00000000668	ENSPMEP00000010756	Plexin_cytopl domain-containing protein.	Sema domain-containing protein.	0.655
ENSPMEP00000000668	ENSPMEP00000022795	ENSPMEP00000000668	ENSPMEP00000022795	Plexin_cytopl domain-containing protein.	Sema domain-containing protein.	0.729
ENSPMEP00000000668	ENSPMEP00000025333	ENSPMEP00000000668	ENSPMEP00000025333	Plexin_cytopl domain-containing protein.	Sema domain-containing protein.	0.694
ENSPMEP00000000668	LOC106912208	ENSPMEP00000000668	ENSPMEP00000006217	Plexin_cytopl domain-containing protein.	Plexin A3.	0.890
ENSPMEP00000000668	LOC106928996	ENSPMEP00000000668	ENSPMEP00000002957	Plexin_cytopl domain-containing protein.	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb; Belongs to the semaphorin family.	0.481
ENSPMEP00000000668	plxna4	ENSPMEP00000000668	ENSPMEP00000034554	Plexin_cytopl domain-containing protein.	Plexin A4.	0.871
ENSPMEP00000003807	ENSPMEP00000007324	ENSPMEP00000003807	ENSPMEP00000007324	Plexin_cytopl domain-containing protein.	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa; Belongs to the semaphorin family.	0.481
ENSPMEP00000003807	LOC106928996	ENSPMEP00000003807	ENSPMEP00000002957	Plexin_cytopl domain-containing protein.	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb; Belongs to the semaphorin family.	0.589
ENSPMEP00000007324	ENSPMEP00000000668	ENSPMEP00000007324	ENSPMEP00000000668	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa; Belongs to the semaphorin family.	Plexin_cytopl domain-containing protein.	0.481
ENSPMEP00000007324	ENSPMEP00000003807	ENSPMEP00000007324	ENSPMEP00000003807	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa; Belongs to the semaphorin family.	Plexin_cytopl domain-containing protein.	0.481
ENSPMEP00000007324	ENSPMEP00000010756	ENSPMEP00000007324	ENSPMEP00000010756	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa; Belongs to the semaphorin family.	Sema domain-containing protein.	0.481
ENSPMEP00000007324	ENSPMEP00000011819	ENSPMEP00000007324	ENSPMEP00000011819	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa; Belongs to the semaphorin family.	Plexin_cytopl domain-containing protein.	0.481
ENSPMEP00000007324	ENSPMEP00000011832	ENSPMEP00000007324	ENSPMEP00000011832	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa; Belongs to the semaphorin family.	Uncharacterized protein.	0.481
ENSPMEP00000007324	ENSPMEP00000018443	ENSPMEP00000007324	ENSPMEP00000018443	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa; Belongs to the semaphorin family.	Sema domain-containing protein.	0.462
ENSPMEP00000007324	ENSPMEP00000022795	ENSPMEP00000007324	ENSPMEP00000022795	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa; Belongs to the semaphorin family.	Sema domain-containing protein.	0.462
ENSPMEP00000007324	ENSPMEP00000025333	ENSPMEP00000007324	ENSPMEP00000025333	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa; Belongs to the semaphorin family.	Sema domain-containing protein.	0.642
ENSPMEP00000007324	LOC106907692	ENSPMEP00000007324	ENSPMEP00000019215	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa; Belongs to the semaphorin family.	Plexin_cytopl domain-containing protein.	0.481
ENSPMEP00000007324	LOC106908941	ENSPMEP00000007324	ENSPMEP00000001936	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa; Belongs to the semaphorin family.	Plexin C1.	0.481
ENSPMEP00000007324	LOC106912208	ENSPMEP00000007324	ENSPMEP00000006217	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa; Belongs to the semaphorin family.	Plexin A3.	0.481