STRINGSTRING
LOC106904088 LOC106904088 EPRS1 EPRS1 ptges ptges tnfrsf11a tnfrsf11a pla2g6 pla2g6 LOC106933562 LOC106933562 tnfsf11 tnfsf11
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106904088Glutamyl-prolyl-tRNA synthetase. (1061 aa)
EPRS1Glutamyl-prolyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (848 aa)
ptgesProstaglandin E synthase. (146 aa)
tnfrsf11aTumor necrosis factor receptor superfamily, member 11a, NFKB activator. (658 aa)
pla2g6Phospholipase A2, group VI (cytosolic, calcium-independent). (799 aa)
LOC106933562Phospholipase A(2). (152 aa)
tnfsf11TNF superfamily member 11; Belongs to the tumor necrosis factor family. (268 aa)
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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