STRINGSTRING
LOC106906194 LOC106906194 hlx hlx LOC106909247 LOC106909247 tbx21 tbx21 ENSPMEP00000028739 ENSPMEP00000028739 itch itch vsir vsir lgals12 lgals12 cbfb cbfb ENSPMEP00000005626 ENSPMEP00000005626 rc3h1 rc3h1 LOC106910308 LOC106910308 LOC106908775 LOC106908775 rc3h2 rc3h2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106906194Zinc finger CCCH-type containing 12A. (627 aa)
hlxH2.0-like homeo box 1 (Drosophila). (473 aa)
LOC106909247Itchy E3 ubiquitin protein ligase b. (331 aa)
tbx21T-box transcription factor 21. (614 aa)
ENSPMEP00000028739Uncharacterized protein. (284 aa)
itchE3 ubiquitin-protein ligase. (869 aa)
vsirV-set immunoregulatory receptor. (289 aa)
lgals12Galectin. (315 aa)
cbfbCore-binding factor subunit beta. (188 aa)
ENSPMEP00000005626Uncharacterized protein. (94 aa)
rc3h1Ring finger and CCCH-type domains 1b. (1120 aa)
LOC106910308Si:dkey-206d17.12. (556 aa)
LOC106908775Core-binding factor subunit beta. (76 aa)
rc3h2Ring finger and CCCH-type domains 2. (1109 aa)
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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