STRINGSTRING
bud31 bud31 zmat5 zmat5 crnkl1 crnkl1 cwc27 cwc27 snrpd3 snrpd3 snrnp70 snrnp70 tfip11 tfip11 eif4a3 eif4a3 rbm22 rbm22 rbmx rbmx paxbp1 paxbp1 dhx16 dhx16 sf1 sf1 zcrb1 zcrb1 eftud2 eftud2 LOC106905282 LOC106905282 ctnnbl1 ctnnbl1 rnpc3 rnpc3 ENSPMEP00000002500 ENSPMEP00000002500 ENSPMEP00000002318 ENSPMEP00000002318 DDX41 DDX41 u2af2 u2af2 ENSPMEP00000001665 ENSPMEP00000001665 LOC106911459 LOC106911459 rbm41 rbm41 cwc15 cwc15 slu7 slu7 ENSPMEP00000034492 ENSPMEP00000034492 ENSPMEP00000034198 ENSPMEP00000034198 uhrf1bp1 uhrf1bp1 snrpd1 snrpd1 rbmx2 rbmx2 ENSPMEP00000032955 ENSPMEP00000032955 ENSPMEP00000032120 ENSPMEP00000032120 gpatch1 gpatch1 DHX15-2 DHX15-2 LOC106928616 LOC106928616 UPF1 UPF1 dhx38 dhx38 ddx23 ddx23 cdc40 cdc40 yju2 yju2 shd shd sf3b2 sf3b2 snw1 snw1 LOC106920762 LOC106920762 prpf38a prpf38a hnrnpm hnrnpm WDR25 WDR25 rnf113a rnf113a mtrex mtrex snrpc snrpc aar2 aar2 wdr83 wdr83 sf3a2 sf3a2 ppwd1 ppwd1 adar adar cwc22 cwc22 LOC106923666 LOC106923666 mthfsd mthfsd prpf18 prpf18 prpf38b prpf38b aqr aqr dhx35 dhx35 LOC106927112 LOC106927112 LOC106930308 LOC106930308 gpkow gpkow prpf4b prpf4b zmat2 zmat2 ENSPMEP00000020623 ENSPMEP00000020623 cwc25 cwc25 LOC106917271 LOC106917271 wbp4 wbp4 ccdc12 ccdc12 mfap1 mfap1 prpf40a prpf40a sart3 sart3 ppil3 ppil3 sf3a3 sf3a3 snrnp200 snrnp200 cactin cactin ess2 ess2 luc7l luc7l sf3b3 sf3b3 ppie ppie SMU1 SMU1 DHX15 DHX15 SNIP1 SNIP1 luc7l3 luc7l3 EFL1 EFL1 snrnp48 snrnp48 ENSPMEP00000015289 ENSPMEP00000015289 ENSPMEP00000015070 ENSPMEP00000015070 cwf19l1 cwf19l1 cwf19l2 cwf19l2 prpf39 prpf39 MYEF2 MYEF2 snrnp40 snrnp40 lix1l lix1l myef2 myef2 ppil1 ppil1 xab2 xab2 ube2j1 ube2j1 SRRM3 SRRM3 ENSPMEP00000009895 ENSPMEP00000009895 LOC106931976 LOC106931976 LOC106927375 LOC106927375 ENSPMEP00000008731 ENSPMEP00000008731 ccdc130 ccdc130
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
bud31BUD31 homolog. (144 aa)
zmat5Zinc finger, matrin-type 5. (175 aa)
crnkl1Crooked neck pre-mRNA splicing factor 1. (736 aa)
cwc27CWC27 spliceosome associated cyclophilin. (473 aa)
snrpd3Small nuclear ribonucleoprotein Sm D3. (127 aa)
snrnp70Small nuclear ribonucleoprotein 70 (U1). (466 aa)
tfip11Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Belongs to the TFP11/STIP family. (830 aa)
eif4a3Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. (406 aa)
rbm22RNA binding motif protein 22. (408 aa)
rbmxRNA binding motif protein X-linked. (383 aa)
paxbp1PAX3 and PAX7 binding protein 1. (909 aa)
dhx16DEAH (Asp-Glu-Ala-His) box polypeptide 16. (1052 aa)
sf1Splicing factor 1. (676 aa)
zcrb1Zinc finger CCHC-type and RNA binding motif 1. (220 aa)
eftud2Elongation factor Tu GTP binding domain containing 2. (971 aa)
LOC106905282RRM domain-containing protein. (306 aa)
ctnnbl1Catenin, beta like 1. (539 aa)
rnpc3RNA-binding region (RNP1, RRM) containing 3. (520 aa)
ENSPMEP00000002500Uncharacterized protein. (110 aa)
ENSPMEP00000002318Small nuclear ribonucleoprotein polypeptide F. (85 aa)
DDX41DEAD-box helicase 41. (615 aa)
u2af2U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (470 aa)
ENSPMEP00000001665PWI domain-containing protein. (79 aa)
LOC106911459Serine/arginine repetitive matrix 1. (794 aa)
rbm41RNA binding motif protein 41. (440 aa)
cwc15CWC15 spliceosome associated protein homolog. (238 aa)
slu7SLU7 homolog, splicing factor. (565 aa)
ENSPMEP00000034492RED_N domain-containing protein. (244 aa)
ENSPMEP00000034198Uncharacterized protein. (44 aa)
uhrf1bp1UHRF1 binding protein 1. (1332 aa)
snrpd1Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (113 aa)
rbmx2RNA binding motif protein X-linked 2. (299 aa)
ENSPMEP00000032955SEC63 domain-containing protein. (153 aa)
ENSPMEP00000032120Splicing factor 3a, subunit 1. (677 aa)
gpatch1G patch domain containing 1. (719 aa)
DHX15-2Helicase ATP-binding domain-containing protein. (297 aa)
LOC106928616RRM domain-containing protein. (320 aa)
UPF1UPF1 RNA helicase and ATPase. (1098 aa)
dhx38DEAH (Asp-Glu-Ala-His) box polypeptide 38. (1253 aa)
ddx23DEAD (Asp-Glu-Ala-Asp) box polypeptide 23. (804 aa)
cdc40Cell division cycle 40 homolog (S. cerevisiae). (581 aa)
yju2YJU2 splicing factor homolog. (341 aa)
shdSrc homology 2 domain containing transforming protein D, a. (417 aa)
sf3b2Splicing factor 3b, subunit 2. (855 aa)
snw1SNW domain containing 1. (536 aa)
LOC106920762Zgc:158803. (421 aa)
prpf38aPre-mRNA processing factor 38A. (309 aa)
hnrnpmHeterogeneous nuclear ribonucleoprotein M. (651 aa)
WDR25WD repeat domain 25. (471 aa)
rnf113aRing finger protein 113A. (322 aa)
mtrexMtr4 exosome RNA helicase. (948 aa)
snrpcU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (147 aa)
aar2AAR2 splicing factor. (358 aa)
wdr83WD repeat domain containing 83. (323 aa)
sf3a2Splicing factor 3a, subunit 2. (294 aa)
ppwd1Peptidylprolyl isomerase domain and WD repeat containing 1. (667 aa)
adarAdenosine deaminase RNA specific. (1361 aa)
cwc22CWC22 spliceosome associated protein homolog. (1002 aa)
LOC106923666Serine/arginine repetitive matrix 2. (1295 aa)
mthfsdMethenyltetrahydrofolate synthetase domain containing. (541 aa)
prpf18PRP18 pre-mRNA processing factor 18 homolog (yeast). (350 aa)
prpf38bUncharacterized protein. (475 aa)
aqrAquarius intron-binding spliceosomal factor. (1471 aa)
dhx35DEAH-box helicase 35. (699 aa)
LOC106927112U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (449 aa)
LOC106930308Si:ch211-114c17.1. (721 aa)
gpkowG patch domain and KOW motifs. (519 aa)
prpf4bPre-mRNA processing factor 4Bb. (1014 aa)
zmat2Zinc finger, matrin-type 2. (201 aa)
ENSPMEP00000020623RED_C domain-containing protein. (164 aa)
cwc25CWC25 spliceosome associated protein homolog. (396 aa)
LOC106917271DEAH (Asp-Glu-Ala-His) box helicase 15. (300 aa)
wbp4Uncharacterized protein. (434 aa)
ccdc12Coiled-coil domain containing 12. (202 aa)
mfap1Microfibril associated protein 1. (440 aa)
prpf40aPRP40 pre-mRNA processing factor 40 homolog A. (883 aa)
sart3Spliceosome associated factor 3, U4/U6 recycling protein. (945 aa)
ppil3Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (171 aa)
sf3a3Splicing factor 3a, subunit 3. (435 aa)
snrnp200Small nuclear ribonucleoprotein 200 (U5). (1841 aa)
cactinCactin. (853 aa)
ess2Ess-2 splicing factor homolog. (475 aa)
luc7lLUC7-like (S. cerevisiae). (363 aa)
sf3b3Splicing factor 3b, subunit 3. (1217 aa)
ppiePeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (301 aa)
SMU1SMU1 DNA replication regulator and spliceosomal factor. (513 aa)
DHX15DEAH-box helicase 15. (762 aa)
SNIP1Smad nuclear interacting protein 1. (364 aa)
luc7l3Uncharacterized protein. (485 aa)
EFL1Elongation factor like GTPase 1. (1103 aa)
snrnp48Small nuclear ribonucleoprotein 48 (U11/U12). (342 aa)
ENSPMEP00000015289Serine/arginine repetitive matrix 4. (410 aa)
ENSPMEP00000015070DUF1604 domain-containing protein. (97 aa)
cwf19l1CWF19 like cell cycle control factor 1. (551 aa)
cwf19l2CWF19 like cell cycle control factor 2. (922 aa)
prpf39PRP39 pre-mRNA processing factor 39 homolog (yeast). (768 aa)
MYEF2Myelin expression factor 2-like. (557 aa)
snrnp40Small nuclear ribonucleoprotein 40 (U5). (347 aa)
lix1lSplicing factor 3b, subunit 4. (687 aa)
myef2Myelin expression factor 2. (557 aa)
ppil1Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (166 aa)
xab2XPA binding protein 2. (849 aa)
ube2j1Ubiquitin-conjugating enzyme E2, J1. (321 aa)
SRRM3Serine/arginine repetitive matrix 3. (637 aa)
ENSPMEP00000009895annotation not available (79 aa)
LOC106931976GC-rich sequence DNA-binding factor 2. (868 aa)
LOC106927375Uncharacterized protein. (1094 aa)
ENSPMEP00000008731Helicase ATP-binding domain-containing protein. (234 aa)
ccdc130Coiled-coil domain containing 130. (393 aa)
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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