12 items (Poecilia mexicana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	gemin5	Gem (nuclear organelle) associated protein 5. (1428 aa)
	snrpd3	Small nuclear ribonucleoprotein Sm D3. (127 aa)
	gemin8	Gem (nuclear organelle) associated protein 8. (198 aa)
	gemin2	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. (266 aa)
	gemin4	Gem (nuclear organelle) associated protein 4. (1117 aa)
	snrpg	Small nuclear ribonucleoprotein G. (76 aa)
	gemin6	Gem (nuclear organelle) associated protein 6. (249 aa)
	ddx20	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family. (765 aa)
	gemin7	Gem (nuclear organelle) associated protein 7. (128 aa)
	LOC106918726	Survival of motor neuron 1, telomeric. (283 aa)
	strap	Serine/threonine kinase receptor associated protein. (316 aa)
	snrpd1	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (113 aa)

Your Current Organism:

Poecilia mexicana

NCBI taxonomy Id: 48701
Other names: shortfin molly

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106918726	ddx20	ENSPMEP00000030567	ENSPMEP00000024016	Survival of motor neuron 1, telomeric.	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family.	0.995
LOC106918726	gemin2	ENSPMEP00000030567	ENSPMEP00000009286	Survival of motor neuron 1, telomeric.	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.	0.990
LOC106918726	gemin4	ENSPMEP00000030567	ENSPMEP00000009789	Survival of motor neuron 1, telomeric.	Gem (nuclear organelle) associated protein 4.	0.951
LOC106918726	gemin5	ENSPMEP00000030567	ENSPMEP00000002417	Survival of motor neuron 1, telomeric.	Gem (nuclear organelle) associated protein 5.	0.949
LOC106918726	gemin6	ENSPMEP00000030567	ENSPMEP00000016536	Survival of motor neuron 1, telomeric.	Gem (nuclear organelle) associated protein 6.	0.727
LOC106918726	gemin7	ENSPMEP00000030567	ENSPMEP00000028133	Survival of motor neuron 1, telomeric.	Gem (nuclear organelle) associated protein 7.	0.920
LOC106918726	gemin8	ENSPMEP00000030567	ENSPMEP00000008335	Survival of motor neuron 1, telomeric.	Gem (nuclear organelle) associated protein 8.	0.949
LOC106918726	snrpd1	ENSPMEP00000030567	ENSPMEP00000033441	Survival of motor neuron 1, telomeric.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.990
LOC106918726	snrpd3	ENSPMEP00000030567	ENSPMEP00000006921	Survival of motor neuron 1, telomeric.	Small nuclear ribonucleoprotein Sm D3.	0.911
LOC106918726	snrpg	ENSPMEP00000030567	ENSPMEP00000016284	Survival of motor neuron 1, telomeric.	Small nuclear ribonucleoprotein G.	0.969
LOC106918726	strap	ENSPMEP00000030567	ENSPMEP00000031835	Survival of motor neuron 1, telomeric.	Serine/threonine kinase receptor associated protein.	0.893
ddx20	LOC106918726	ENSPMEP00000024016	ENSPMEP00000030567	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family.	Survival of motor neuron 1, telomeric.	0.995
ddx20	gemin2	ENSPMEP00000024016	ENSPMEP00000009286	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family.	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.	0.971
ddx20	gemin4	ENSPMEP00000024016	ENSPMEP00000009789	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family.	Gem (nuclear organelle) associated protein 4.	0.994
ddx20	gemin5	ENSPMEP00000024016	ENSPMEP00000002417	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family.	Gem (nuclear organelle) associated protein 5.	0.997
ddx20	gemin6	ENSPMEP00000024016	ENSPMEP00000016536	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family.	Gem (nuclear organelle) associated protein 6.	0.956
ddx20	gemin7	ENSPMEP00000024016	ENSPMEP00000028133	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family.	Gem (nuclear organelle) associated protein 7.	0.996
ddx20	gemin8	ENSPMEP00000024016	ENSPMEP00000008335	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family.	Gem (nuclear organelle) associated protein 8.	0.995
ddx20	snrpd1	ENSPMEP00000024016	ENSPMEP00000033441	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.850
ddx20	snrpd3	ENSPMEP00000024016	ENSPMEP00000006921	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family.	Small nuclear ribonucleoprotein Sm D3.	0.810