(51 nodes) Armadillo network (Poecilia mexicana)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106922265	Armadillo repeat-containing protein 1. (271 aa)
	armc4	Armadillo repeat containing 4. (838 aa)
	PKP1	Plakophilin 1. (703 aa)
	hspbp1	HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1. (335 aa)
	unc45b	Unc-45 myosin chaperone B. (930 aa)
	LOC106931162	Catenin (cadherin-associated protein), delta 1. (925 aa)
	LOC106905494	USO1 vesicle transport factor. (939 aa)
	LOC106905476	Importin subunit alpha; Belongs to the importin alpha family. (517 aa)
	PKP4	Plakophilin 4. (1198 aa)
	ARVCF	ARVCF delta catenin family member b. (939 aa)
	CTNND1	Catenin delta 1. (913 aa)
	zer1	Zyg-11 related, cell cycle regulator. (657 aa)
	LOC106908947	AP complex subunit beta. (876 aa)
	armc5	Armadillo repeat containing 5. (1132 aa)
	zyg11b	Zyg-11 homolog (C. elegans). (759 aa)
	terb1	Telomere repeat binding bouquet formation protein 1. (581 aa)
	kpna1	Importin subunit alpha; Belongs to the importin alpha family. (538 aa)
	LOC106925760	Plakophilin 3b. (767 aa)
	LOC106906795	Uncharacterized protein. (352 aa)
	kpna4	Importin subunit alpha; Belongs to the importin alpha family. (521 aa)
	tmco6	Transmembrane and coiled-coil domains 6. (495 aa)
	armc2	Armadillo repeat containing 2. (827 aa)
	kpna6	Importin subunit alpha; Belongs to the importin alpha family. (538 aa)
	armc8	Armadillo repeat containing 8. (712 aa)
	LOC106920189	Kinesin-associated protein 3b. (777 aa)
	LOC106928650	USO1 vesicle transport factor. (937 aa)
	ARMC6	Armadillo repeat containing 6. (463 aa)
	LOC106919380	Uncharacterized protein. (738 aa)
	serac1	Serine active site containing 1. (659 aa)
	LOC106909308	Uncharacterized protein. (297 aa)
	armc7	Armadillo repeat containing 7. (188 aa)
	KPNA2-2	Importin subunit alpha; Belongs to the importin alpha family. (525 aa)
	PKP3	Plakophilin 3. (871 aa)
	LOC106923511	ARVCF delta catenin family member a. (837 aa)
	heatr3	HEAT repeat containing 3. (675 aa)
	INSC	INSC spindle orientation adaptor protein. (582 aa)
	kifap3	Kinesin-associated protein 3a. (773 aa)
	ENSPMEP00000009915	Uncharacterized protein. (321 aa)
	LOC106920228	Si:dkey-191g9.5. (560 aa)
	LOC106931515	Junction plakoglobin a. (721 aa)
	KPNA2	Importin subunit alpha; Belongs to the importin alpha family. (539 aa)
	apc2	APC regulator of WNT signaling pathway 2. (1574 aa)
	spag6	Sperm associated antigen 6. (501 aa)
	armc3	Armadillo repeat containing 3. (728 aa)
	LOC106904022	Uncharacterized protein. (872 aa)
	ctnnb1	Catenin (cadherin-associated protein), beta 1. (783 aa)
	kpna3	Importin subunit alpha; Belongs to the importin alpha family. (555 aa)
	LOC106904562	Uncharacterized protein. (426 aa)
	LOC106921005	Plakophilin 1b. (732 aa)
	LOC106921026	Uncharacterized protein. (768 aa)
	ENSPMEP00000012535	Uncharacterized protein. (309 aa)

Your Current Organism:

Poecilia mexicana

NCBI taxonomy Id: 48701
Other names: shortfin molly

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARMC6	armc2	ENSPMEP00000011827	ENSPMEP00000025802	Armadillo repeat containing 6.	Armadillo repeat containing 2.	0.502
ARMC6	armc3	ENSPMEP00000011827	ENSPMEP00000005084	Armadillo repeat containing 6.	Armadillo repeat containing 3.	0.438
ARVCF	LOC106921026	ENSPMEP00000020899	ENSPMEP00000001132	ARVCF delta catenin family member b.	Uncharacterized protein.	0.686
ARVCF	LOC106931515	ENSPMEP00000020899	ENSPMEP00000007523	ARVCF delta catenin family member b.	Junction plakoglobin a.	0.806
ARVCF	ctnnb1	ENSPMEP00000020899	ENSPMEP00000002621	ARVCF delta catenin family member b.	Catenin (cadherin-associated protein), beta 1.	0.886
CTNND1	LOC106921026	ENSPMEP00000020965	ENSPMEP00000001132	Catenin delta 1.	Uncharacterized protein.	0.686
CTNND1	LOC106931162	ENSPMEP00000020965	ENSPMEP00000017130	Catenin delta 1.	Catenin (cadherin-associated protein), delta 1.	0.921
CTNND1	LOC106931515	ENSPMEP00000020965	ENSPMEP00000007523	Catenin delta 1.	Junction plakoglobin a.	0.806
CTNND1	ctnnb1	ENSPMEP00000020965	ENSPMEP00000002621	Catenin delta 1.	Catenin (cadherin-associated protein), beta 1.	0.886
ENSPMEP00000009915	LOC106921026	ENSPMEP00000009915	ENSPMEP00000001132	Uncharacterized protein.	Uncharacterized protein.	0.686
ENSPMEP00000009915	LOC106931515	ENSPMEP00000009915	ENSPMEP00000007523	Uncharacterized protein.	Junction plakoglobin a.	0.686
ENSPMEP00000009915	ctnnb1	ENSPMEP00000009915	ENSPMEP00000002621	Uncharacterized protein.	Catenin (cadherin-associated protein), beta 1.	0.686
ENSPMEP00000012535	LOC106921026	ENSPMEP00000012535	ENSPMEP00000001132	Uncharacterized protein.	Uncharacterized protein.	0.686
ENSPMEP00000012535	LOC106931515	ENSPMEP00000012535	ENSPMEP00000007523	Uncharacterized protein.	Junction plakoglobin a.	0.750
ENSPMEP00000012535	ctnnb1	ENSPMEP00000012535	ENSPMEP00000002621	Uncharacterized protein.	Catenin (cadherin-associated protein), beta 1.	0.792
KPNA2	kpna1	ENSPMEP00000006941	ENSPMEP00000023787	Importin subunit alpha; Belongs to the importin alpha family.	Importin subunit alpha; Belongs to the importin alpha family.	0.643
KPNA2	kpna6	ENSPMEP00000006941	ENSPMEP00000025910	Importin subunit alpha; Belongs to the importin alpha family.	Importin subunit alpha; Belongs to the importin alpha family.	0.643
KPNA2-2	kpna1	ENSPMEP00000033737	ENSPMEP00000023787	Importin subunit alpha; Belongs to the importin alpha family.	Importin subunit alpha; Belongs to the importin alpha family.	0.643
KPNA2-2	kpna6	ENSPMEP00000033737	ENSPMEP00000025910	Importin subunit alpha; Belongs to the importin alpha family.	Importin subunit alpha; Belongs to the importin alpha family.	0.644
LOC106904022	LOC106921026	ENSPMEP00000003548	ENSPMEP00000001132	Uncharacterized protein.	Uncharacterized protein.	0.686