33 items (Poecilia mexicana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	sema5b	Sema domain-containing protein. (913 aa)
	PLXNA2	Plexin A2. (1882 aa)
	sema6a	Semaphorin 6A; Belongs to the semaphorin family. (1004 aa)
	LOC106917766	Si:ch211-129c21.1; Belongs to the semaphorin family. (804 aa)
	LOC106912208	Plexin A3. (1138 aa)
	tmcc1	Uncharacterized protein. (1089 aa)
	LOC106905060	Uncharacterized protein; Belongs to the semaphorin family. (770 aa)
	LOC106931417	Uncharacterized protein; Belongs to the semaphorin family. (838 aa)
	sema4b	Sema domain-containing protein; Belongs to the semaphorin family. (834 aa)
	LOC106920493	Plexin A2. (1822 aa)
	plxnb1	Plexin b1b. (2193 aa)
	sema4g	Uncharacterized protein; Belongs to the semaphorin family. (835 aa)
	met	MET proto-oncogene, receptor tyrosine kinase. (1418 aa)
	plxna4	Plexin A4. (1375 aa)
	LOC106921399	Plexin domain containing 1. (482 aa)
	LOC106918080	Uncharacterized protein; Belongs to the semaphorin family. (880 aa)
	LOC106928500	Uncharacterized protein. (321 aa)
	LOC106915444	Plexin b1a. (2162 aa)
	LOC106907715	Attractin-like 1b. (1378 aa)
	PLXDC2	Plexin domain containing 2. (529 aa)
	SEMA4D	Uncharacterized protein; Belongs to the semaphorin family. (883 aa)
	atrn	Attractin. (1287 aa)
	LOC106920376	Si:ch211-113g11.6; Belongs to the semaphorin family. (471 aa)
	ENSPMEP00000025333	Sema domain-containing protein. (598 aa)
	plxna1	Sema domain-containing protein. (1948 aa)
	megf8	Multiple EGF-like-domains 8. (2879 aa)
	LOC106911984	Sema domain-containing protein; Belongs to the semaphorin family. (638 aa)
	LOC106922715	Sema domain-containing protein. (1783 aa)
	sema4c	Uncharacterized protein; Belongs to the semaphorin family. (861 aa)
	plxnb2	Plexin b2b. (1848 aa)
	LOC106918638	Semaphorin 4e; Belongs to the semaphorin family. (753 aa)
	LOC106926550	Sema domain-containing protein. (1066 aa)
	LOC106909963	Sema domain-containing protein; Belongs to the semaphorin family. (772 aa)

Your Current Organism:

Poecilia mexicana

NCBI taxonomy Id: 48701
Other names: shortfin molly

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPMEP00000025333	LOC106905060	ENSPMEP00000025333	ENSPMEP00000008519	Sema domain-containing protein.	Uncharacterized protein; Belongs to the semaphorin family.	0.638
ENSPMEP00000025333	LOC106909963	ENSPMEP00000025333	ENSPMEP00000033777	Sema domain-containing protein.	Sema domain-containing protein; Belongs to the semaphorin family.	0.638
ENSPMEP00000025333	LOC106911984	ENSPMEP00000025333	ENSPMEP00000029476	Sema domain-containing protein.	Sema domain-containing protein; Belongs to the semaphorin family.	0.781
ENSPMEP00000025333	LOC106917766	ENSPMEP00000025333	ENSPMEP00000006320	Sema domain-containing protein.	Si:ch211-129c21.1; Belongs to the semaphorin family.	0.781
ENSPMEP00000025333	LOC106918080	ENSPMEP00000025333	ENSPMEP00000014558	Sema domain-containing protein.	Uncharacterized protein; Belongs to the semaphorin family.	0.655
ENSPMEP00000025333	LOC106918638	ENSPMEP00000025333	ENSPMEP00000032820	Sema domain-containing protein.	Semaphorin 4e; Belongs to the semaphorin family.	0.781
ENSPMEP00000025333	LOC106920376	ENSPMEP00000025333	ENSPMEP00000024913	Sema domain-containing protein.	Si:ch211-113g11.6; Belongs to the semaphorin family.	0.618
ENSPMEP00000025333	LOC106926550	ENSPMEP00000025333	ENSPMEP00000033622	Sema domain-containing protein.	Sema domain-containing protein.	0.696
ENSPMEP00000025333	LOC106931417	ENSPMEP00000025333	ENSPMEP00000010569	Sema domain-containing protein.	Uncharacterized protein; Belongs to the semaphorin family.	0.638
ENSPMEP00000025333	SEMA4D	ENSPMEP00000025333	ENSPMEP00000007198	Sema domain-containing protein.	Uncharacterized protein; Belongs to the semaphorin family.	0.872
ENSPMEP00000025333	met	ENSPMEP00000025333	ENSPMEP00000013002	Sema domain-containing protein.	MET proto-oncogene, receptor tyrosine kinase.	0.689
ENSPMEP00000025333	sema4b	ENSPMEP00000025333	ENSPMEP00000012542	Sema domain-containing protein.	Sema domain-containing protein; Belongs to the semaphorin family.	0.638
ENSPMEP00000025333	sema4c	ENSPMEP00000025333	ENSPMEP00000031297	Sema domain-containing protein.	Uncharacterized protein; Belongs to the semaphorin family.	0.655
ENSPMEP00000025333	sema4g	ENSPMEP00000025333	ENSPMEP00000002922	Sema domain-containing protein.	Uncharacterized protein; Belongs to the semaphorin family.	0.655
ENSPMEP00000025333	sema5b	ENSPMEP00000025333	ENSPMEP00000033796	Sema domain-containing protein.	Sema domain-containing protein.	0.696
ENSPMEP00000025333	sema6a	ENSPMEP00000025333	ENSPMEP00000006785	Sema domain-containing protein.	Semaphorin 6A; Belongs to the semaphorin family.	0.510
LOC106905060	ENSPMEP00000025333	ENSPMEP00000008519	ENSPMEP00000025333	Uncharacterized protein; Belongs to the semaphorin family.	Sema domain-containing protein.	0.638
LOC106905060	LOC106912208	ENSPMEP00000008519	ENSPMEP00000006217	Uncharacterized protein; Belongs to the semaphorin family.	Plexin A3.	0.586
LOC106905060	LOC106915444	ENSPMEP00000008519	ENSPMEP00000017195	Uncharacterized protein; Belongs to the semaphorin family.	Plexin b1a.	0.638
LOC106905060	LOC106918080	ENSPMEP00000008519	ENSPMEP00000014558	Uncharacterized protein; Belongs to the semaphorin family.	Uncharacterized protein; Belongs to the semaphorin family.	0.487