STRINGSTRING
otud7a otud7a vcpip1 vcpip1 LOC106926147 LOC106926147 otud4 otud4 tnfaip3 tnfaip3 zranb1 zranb1 otub1 otub1 LOC106931783 LOC106931783 otud7b otud7b LOC106903855 LOC106903855 otud5 otud5 otud6b otud6b otud3 otud3 LOC106921659 LOC106921659 yod1 yod1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
otud7aOTU deubiquitinase 7A. (956 aa)
vcpip1Valosin containing protein (p97)/p47 complex interacting protein 1. (1164 aa)
LOC106926147OTU domain-containing protein. (402 aa)
otud4OTU domain-containing protein. (918 aa)
tnfaip3Tumor necrosis factor, alpha-induced protein 3. (824 aa)
zranb1Uncharacterized protein. (708 aa)
otub1Ubiquitin thioesterase. (266 aa)
LOC106931783Uncharacterized protein. (735 aa)
otud7bOTU deubiquitinase 7B. (913 aa)
LOC106903855Zinc finger, RAN-binding domain containing 1b. (771 aa)
otud5OTU deubiquitinase 5a. (551 aa)
otud6bOTU domain containing 6B. (316 aa)
otud3OTU deubiquitinase 3. (358 aa)
LOC106921659OTU domain-containing protein. (227 aa)
yod1YOD1 deubiquitinase. (300 aa)
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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