(83 nodes) Protein-tyrosine phosphatase, catalytic network (Poecilia mexicana)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106904808	Tyrosine-protein phosphatase non-receptor type. (404 aa)
	ptpn12	Uncharacterized protein. (795 aa)
	ENSPMEP00000000768	Uncharacterized protein. (312 aa)
	ENSPMEP00000000823	Uncharacterized protein. (327 aa)
	dusp1	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (376 aa)
	LOC106932994	Protein tyrosine phosphatase non-receptor type 11b. (584 aa)
	ptprq	Protein tyrosine phosphatase receptor type Q. (2244 aa)
	ptpdc1	Protein tyrosine phosphatase domain containing 1a. (690 aa)
	ptpn11	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (596 aa)
	LOC106912424	TYR_PHOSPHATASE_2 domain-containing protein. (636 aa)
	odf3b	Zgc:77752. (446 aa)
	LOC106910621	Protein tyrosine phosphatase 4A2a. (168 aa)
	ptprg	Carbonic anhydrase XVI b. (1408 aa)
	PTPN20	Protein tyrosine phosphatase non-receptor type 20. (221 aa)
	LOC106910557	Protein tyrosine phosphatase receptor type Na. (572 aa)
	LOC106905232	Protein tyrosine phosphatase non-receptor type 6. (583 aa)
	PTPRD	Protein tyrosine phosphatase receptor type D. (1388 aa)
	LOC106932081	Uncharacterized protein. (394 aa)
	LOC106908005	Phosphatase and tensin homolog; Tumor suppressor. Acts as a dual-specificity protein phosphatase, dephosphorylating tyrosine-, serine- and threonine- phosphorylated proteins. Also acts as a lipid phosphatase. Belongs to the PTEN phosphatase protein family. (412 aa)
	LOC106919585	Uncharacterized protein. (705 aa)
	LOC106920242	Uncharacterized protein. (553 aa)
	ENSPMEP00000009104	Uncharacterized protein. (233 aa)
	ptpre	Receptor-type tyrosine-protein phosphatase. (636 aa)
	ptpn4	Protein tyrosine phosphatase non-receptor type 4a. (1027 aa)
	LOC106908806	Uncharacterized protein. (346 aa)
	LOC106918914	Uncharacterized protein. (347 aa)
	LOC106934271	Uncharacterized protein. (743 aa)
	LOC106905811	Myotubularin related protein 7b. (577 aa)
	LOC106916782	Uncharacterized protein. (1450 aa)
	ENSPMEP00000012202	Protein tyrosine phosphatase non-receptor type 5. (370 aa)
	LOC106914115	Transmembrane phosphatase with tensin homology. (512 aa)
	LOC106916149	TYR_PHOSPHATASE_2 domain-containing protein. (315 aa)
	ptprc	Uncharacterized protein. (726 aa)
	LOC106918785	Protein tyrosine phosphatase 4A2b. (173 aa)
	LOC106929895	Protein tyrosine phosphatase non-receptor type 3. (813 aa)
	LOC106909380	Uncharacterized protein. (406 aa)
	LOC106931807	TYR_PHOSPHATASE_2 domain-containing protein. (180 aa)
	ptpra	Receptor-type tyrosine-protein phosphatase alpha. (789 aa)
	LOC106919989	Protein tyrosine phosphatase receptor type Ub. (1442 aa)
	ptpn13	Protein tyrosine phosphatase non-receptor type 13. (2565 aa)
	ptprf	Protein tyrosine phosphatase receptor type Fb. (1913 aa)
	ENSPMEP00000017818	Uncharacterized protein. (625 aa)
	PTPRB	Protein tyrosine phosphatase receptor type B. (2618 aa)
	pten	Phosphatase and tensin homolog; Tumor suppressor. Acts as a dual-specificity protein phosphatase, dephosphorylating tyrosine-, serine- and threonine- phosphorylated proteins. Also acts as a lipid phosphatase. Belongs to the PTEN phosphatase protein family. (446 aa)
	PTPRB-2	Protein tyrosine phosphatase receptor type B. (1457 aa)
	LOC106923832	Protein tyrosine phosphatase domain containing 1b. (670 aa)
	mtm1	Myotubularin 1. (620 aa)
	dusp23	Dual specificity phosphatase 23a. (151 aa)
	mtmr2	Myotubularin related protein 2. (683 aa)
	LOC106916778	Tyrosine-protein phosphatase non-receptor type. (431 aa)
	ENSPMEP00000021593	Uncharacterized protein. (394 aa)
	cdkn3	Cyclin-dependent kinase inhibitor 3; May play a role in cell cycle regulation. Dual specificity phosphatase active toward substrates containing either phosphotyrosine or phosphoserine residues. (209 aa)
	LOC106908319	Uncharacterized protein. (485 aa)
	tns2	Tensin 2b. (1545 aa)
	LOC106904485	Protein tyrosine phosphatase receptor type Sa. (1662 aa)
	LOC106915168	Receptor-type tyrosine-protein phosphatase. (700 aa)
	mtmr7	Myotubularin related protein 7a. (651 aa)
	LOC106930253	Protein tyrosine phosphatase 4A1. (167 aa)
	LOC106910569	Protein tyrosine phosphatase non-receptor type 9a. (494 aa)
	dusp5	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (376 aa)
	ENSPMEP00000025204	Uncharacterized protein. (81 aa)
	LOC106921931	Dual specificity phosphatase 2. (315 aa)
	LOC106916310	Tensin 1b. (1774 aa)
	LOC106928785	Protein tyrosine phosphatase receptor type Ua. (1410 aa)
	ptprk	Protein tyrosine phosphatase receptor type K. (1453 aa)
	ptpn21	Protein tyrosine phosphatase non-receptor type 21. (1196 aa)
	MTMR4	Myotubularin related protein 4. (1159 aa)
	ptpn9	Protein tyrosine phosphatase non-receptor type 9a. (568 aa)
	ptpro	Protein tyrosine phosphatase receptor type O. (377 aa)
	PTPN14	Protein tyrosine phosphatase non-receptor type 14. (1253 aa)
	LOC106906457	Protein tyrosine phosphatase non-receptor type 9b. (749 aa)
	LOC106910023	Protein tyrosine phosphatase receptor type Z1b. (1431 aa)
	ENSPMEP00000030993	Uncharacterized protein. (233 aa)
	LOC106918703	Uncharacterized protein. (1490 aa)
	ptpn23	Protein tyrosine phosphatase, non-receptor type 23, a. (1879 aa)
	LOC106922646	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (367 aa)
	tns3	Uncharacterized protein. (663 aa)
	LOC106918628	Protein tyrosine phosphatase receptor type Sa. (1491 aa)
	mtmr3	Myotubularin related protein 3. (1222 aa)
	mtmr6	Myotubularin related protein 6. (657 aa)
	ENSPMEP00000033935	Protein tyrosine phosphatase receptor type R. (361 aa)
	LOC106906222	Uncharacterized protein. (408 aa)
	LOC106917253	Myotubularin related protein 1a. (647 aa)

Your Current Organism:

Poecilia mexicana

NCBI taxonomy Id: 48701
Other names: shortfin molly

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPMEP00000000768	PTPRB	ENSPMEP00000000768	ENSPMEP00000017995	Uncharacterized protein.	Protein tyrosine phosphatase receptor type B.	0.899
ENSPMEP00000000823	LOC106905232	ENSPMEP00000000823	ENSPMEP00000004820	Uncharacterized protein.	Protein tyrosine phosphatase non-receptor type 6.	0.602
ENSPMEP00000000823	LOC106932994	ENSPMEP00000000823	ENSPMEP00000001892	Uncharacterized protein.	Protein tyrosine phosphatase non-receptor type 11b.	0.602
ENSPMEP00000000823	ptpn11	ENSPMEP00000000823	ENSPMEP00000003082	Uncharacterized protein.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.602
ENSPMEP00000009104	LOC106905232	ENSPMEP00000009104	ENSPMEP00000004820	Uncharacterized protein.	Protein tyrosine phosphatase non-receptor type 6.	0.602
ENSPMEP00000009104	LOC106932994	ENSPMEP00000009104	ENSPMEP00000001892	Uncharacterized protein.	Protein tyrosine phosphatase non-receptor type 11b.	0.602
ENSPMEP00000009104	ptpn11	ENSPMEP00000009104	ENSPMEP00000003082	Uncharacterized protein.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.602
ENSPMEP00000012202	ENSPMEP00000033935	ENSPMEP00000012202	ENSPMEP00000033935	Protein tyrosine phosphatase non-receptor type 5.	Protein tyrosine phosphatase receptor type R.	0.932
ENSPMEP00000012202	LOC106905232	ENSPMEP00000012202	ENSPMEP00000004820	Protein tyrosine phosphatase non-receptor type 5.	Protein tyrosine phosphatase non-receptor type 6.	0.575
ENSPMEP00000012202	LOC106909380	ENSPMEP00000012202	ENSPMEP00000014763	Protein tyrosine phosphatase non-receptor type 5.	Uncharacterized protein.	0.924
ENSPMEP00000012202	LOC106921931	ENSPMEP00000012202	ENSPMEP00000025499	Protein tyrosine phosphatase non-receptor type 5.	Dual specificity phosphatase 2.	0.543
ENSPMEP00000012202	LOC106922646	ENSPMEP00000012202	ENSPMEP00000031719	Protein tyrosine phosphatase non-receptor type 5.	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.543
ENSPMEP00000012202	LOC106932994	ENSPMEP00000012202	ENSPMEP00000001892	Protein tyrosine phosphatase non-receptor type 5.	Protein tyrosine phosphatase non-receptor type 11b.	0.575
ENSPMEP00000012202	PTPN14	ENSPMEP00000012202	ENSPMEP00000028576	Protein tyrosine phosphatase non-receptor type 5.	Protein tyrosine phosphatase non-receptor type 14.	0.439
ENSPMEP00000012202	PTPN20	ENSPMEP00000012202	ENSPMEP00000004534	Protein tyrosine phosphatase non-receptor type 5.	Protein tyrosine phosphatase non-receptor type 20.	0.765
ENSPMEP00000012202	dusp1	ENSPMEP00000012202	ENSPMEP00000001207	Protein tyrosine phosphatase non-receptor type 5.	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.543
ENSPMEP00000012202	dusp5	ENSPMEP00000012202	ENSPMEP00000024353	Protein tyrosine phosphatase non-receptor type 5.	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.543
ENSPMEP00000012202	ptpn11	ENSPMEP00000012202	ENSPMEP00000003082	Protein tyrosine phosphatase non-receptor type 5.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.575
ENSPMEP00000012202	ptpn21	ENSPMEP00000012202	ENSPMEP00000026955	Protein tyrosine phosphatase non-receptor type 5.	Protein tyrosine phosphatase non-receptor type 21.	0.435
ENSPMEP00000012202	ptpn23	ENSPMEP00000012202	ENSPMEP00000031517	Protein tyrosine phosphatase non-receptor type 5.	Protein tyrosine phosphatase, non-receptor type 23, a.	0.481