(17 nodes) Gelsolin-like domain network (Poecilia mexicana)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106904338	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (764 aa)
	sec24c	SEC24 homolog C, COPII coat complex component. (1227 aa)
	LOC106931728	Gelsolin a. (731 aa)
	LOC106903482	HP domain-containing protein. (2610 aa)
	LOC106925306	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (766 aa)
	svil	Supervillin a. (1780 aa)
	LOC106905641	Supervillin d. (1463 aa)
	ENSPMEP00000014484	FLII actin remodeling protein. (513 aa)
	sec24d	SEC24 homolog D, COPII coat complex component. (1065 aa)
	LOC106904251	Scinderin like b. (720 aa)
	LOC106905251	Villin-like. (821 aa)
	capg	Capping protein (actin filament), gelsolin-like b. (386 aa)
	sec24a	SEC24 homolog A, COPII coat complex component. (1090 aa)
	LOC106909978	Uncharacterized protein. (798 aa)
	LOC106920134	Scinderin like a. (706 aa)
	LOC106913187	Gelsolin-like domain-containing protein. (480 aa)
	avil	Advillin. (777 aa)

Your Current Organism:

Poecilia mexicana

NCBI taxonomy Id: 48701
Other names: shortfin molly

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106904251	LOC106905251	ENSPMEP00000009297	ENSPMEP00000004678	Scinderin like b.	Villin-like.	0.495
LOC106904251	LOC106909978	ENSPMEP00000009297	ENSPMEP00000033617	Scinderin like b.	Uncharacterized protein.	0.888
LOC106904251	LOC106920134	ENSPMEP00000009297	ENSPMEP00000028610	Scinderin like b.	Scinderin like a.	0.917
LOC106904251	LOC106931728	ENSPMEP00000009297	ENSPMEP00000020717	Scinderin like b.	Gelsolin a.	0.899
LOC106904251	avil	ENSPMEP00000009297	ENSPMEP00000027150	Scinderin like b.	Advillin.	0.493
LOC106904251	capg	ENSPMEP00000009297	ENSPMEP00000001224	Scinderin like b.	Capping protein (actin filament), gelsolin-like b.	0.566
LOC106904338	LOC106925306	ENSPMEP00000025515	ENSPMEP00000016300	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.882
LOC106904338	sec24a	ENSPMEP00000025515	ENSPMEP00000030448	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	SEC24 homolog A, COPII coat complex component.	0.971
LOC106904338	sec24c	ENSPMEP00000025515	ENSPMEP00000024710	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	SEC24 homolog C, COPII coat complex component.	0.990
LOC106904338	sec24d	ENSPMEP00000025515	ENSPMEP00000013761	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	SEC24 homolog D, COPII coat complex component.	0.980
LOC106905251	LOC106904251	ENSPMEP00000004678	ENSPMEP00000009297	Villin-like.	Scinderin like b.	0.495
LOC106905251	LOC106920134	ENSPMEP00000004678	ENSPMEP00000028610	Villin-like.	Scinderin like a.	0.496
LOC106909978	LOC106904251	ENSPMEP00000033617	ENSPMEP00000009297	Uncharacterized protein.	Scinderin like b.	0.888
LOC106909978	LOC106920134	ENSPMEP00000033617	ENSPMEP00000028610	Uncharacterized protein.	Scinderin like a.	0.890
LOC106909978	LOC106931728	ENSPMEP00000033617	ENSPMEP00000020717	Uncharacterized protein.	Gelsolin a.	0.899
LOC106920134	LOC106904251	ENSPMEP00000028610	ENSPMEP00000009297	Scinderin like a.	Scinderin like b.	0.917
LOC106920134	LOC106905251	ENSPMEP00000028610	ENSPMEP00000004678	Scinderin like a.	Villin-like.	0.496
LOC106920134	LOC106909978	ENSPMEP00000028610	ENSPMEP00000033617	Scinderin like a.	Uncharacterized protein.	0.890
LOC106920134	LOC106931728	ENSPMEP00000028610	ENSPMEP00000020717	Scinderin like a.	Gelsolin a.	0.901
LOC106920134	avil	ENSPMEP00000028610	ENSPMEP00000027150	Scinderin like a.	Advillin.	0.495