STRINGSTRING
nedd4 nedd4 SMURF2 SMURF2 nedd4l nedd4l smurf1 smurf1 wwp1 wwp1 LOC106933754 LOC106933754 itch itch
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
nedd4E3 ubiquitin-protein ligase. (927 aa)
SMURF2E3 ubiquitin-protein ligase. (776 aa)
nedd4lE3 ubiquitin-protein ligase. (935 aa)
smurf1E3 ubiquitin-protein ligase. (727 aa)
wwp1WW domain containing E3 ubiquitin protein ligase 1. (955 aa)
LOC106933754E3 ubiquitin-protein ligase. (890 aa)
itchE3 ubiquitin-protein ligase. (869 aa)
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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