(29 nodes) AAA ATPase, AAA+ lid domain network (Poecilia mexicana)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106928455	Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family. (436 aa)
	atad2b	ATPase family AAA domain containing 2B. (1445 aa)
	LOC106922052	Zgc:136908; Belongs to the AAA ATPase family. (810 aa)
	VPS4B	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family. (508 aa)
	atad1	ATPase family AAA domain containing 1b; Belongs to the AAA ATPase family. (369 aa)
	LOC106920452	AAA domain-containing protein. (750 aa)
	LOC106920363	Bromo domain-containing protein. (1103 aa)
	vcp	Valosin containing protein; Belongs to the AAA ATPase family. (806 aa)
	psmc5	Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family. (406 aa)
	spg7	SPG7 matrix AAA peptidase subunit, paraplegin. (808 aa)
	LOC106927641	Katanin p60 ATPase-containing subunit A1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. (482 aa)
	pex6	Peroxisomal biogenesis factor 6. (1057 aa)
	psmc3	Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family. (427 aa)
	SPATA5	Spermatogenesis associated 5; Belongs to the AAA ATPase family. (673 aa)
	LOC106906387	Uncharacterized protein; Belongs to the AAA ATPase family. (435 aa)
	psmc4	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family. (417 aa)
	LOC106927143	Si:ch1073-174d20.2. (761 aa)
	LOC106908053	YME1-like 1b. (725 aa)
	afg3l2	AFG3-like AAA ATPase 2. (861 aa)
	katnal2	Katanin p60 subunit A-like 2. (339 aa)
	psmc6	Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family. (389 aa)
	nvl	Nuclear VCP like. (815 aa)
	atad2	ATPase family AAA domain containing 2. (1473 aa)
	spata5l1	Spermatogenesis associated 5-like 1. (748 aa)
	pex1	Peroxisomal biogenesis factor 1. (1240 aa)
	nsf	N-ethylmaleimide-sensitive factor a. (743 aa)
	yme1l1	YME1-like 1a. (722 aa)
	fignl1	Fidgetin-like 1; Belongs to the AAA ATPase family. (626 aa)
	LOC106905520	ATPase family AAA domain containing 1a; Belongs to the AAA ATPase family. (381 aa)

Your Current Organism:

Poecilia mexicana

NCBI taxonomy Id: 48701
Other names: shortfin molly

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106905520	LOC106920363	ENSPMEP00000032941	ENSPMEP00000006321	ATPase family AAA domain containing 1a; Belongs to the AAA ATPase family.	Bromo domain-containing protein.	0.438
LOC106905520	LOC106927641	ENSPMEP00000032941	ENSPMEP00000008426	ATPase family AAA domain containing 1a; Belongs to the AAA ATPase family.	Katanin p60 ATPase-containing subunit A1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation.	0.472
LOC106905520	atad2	ENSPMEP00000032941	ENSPMEP00000027568	ATPase family AAA domain containing 1a; Belongs to the AAA ATPase family.	ATPase family AAA domain containing 2.	0.438
LOC106905520	atad2b	ENSPMEP00000032941	ENSPMEP00000000750	ATPase family AAA domain containing 1a; Belongs to the AAA ATPase family.	ATPase family AAA domain containing 2B.	0.438
LOC106905520	katnal2	ENSPMEP00000032941	ENSPMEP00000026844	ATPase family AAA domain containing 1a; Belongs to the AAA ATPase family.	Katanin p60 subunit A-like 2.	0.533
LOC106905520	psmc3	ENSPMEP00000032941	ENSPMEP00000010173	ATPase family AAA domain containing 1a; Belongs to the AAA ATPase family.	Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family.	0.501
LOC106905520	psmc4	ENSPMEP00000032941	ENSPMEP00000019836	ATPase family AAA domain containing 1a; Belongs to the AAA ATPase family.	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.	0.495
LOC106905520	psmc5	ENSPMEP00000032941	ENSPMEP00000007073	ATPase family AAA domain containing 1a; Belongs to the AAA ATPase family.	Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.	0.479
LOC106905520	psmc6	ENSPMEP00000032941	ENSPMEP00000027229	ATPase family AAA domain containing 1a; Belongs to the AAA ATPase family.	Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family.	0.566
LOC106906387	LOC106927641	ENSPMEP00000014341	ENSPMEP00000008426	Uncharacterized protein; Belongs to the AAA ATPase family.	Katanin p60 ATPase-containing subunit A1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation.	0.568
LOC106906387	LOC106928455	ENSPMEP00000014341	ENSPMEP00000017594	Uncharacterized protein; Belongs to the AAA ATPase family.	Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family.	0.899
LOC106906387	VPS4B	ENSPMEP00000014341	ENSPMEP00000004443	Uncharacterized protein; Belongs to the AAA ATPase family.	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	0.920
LOC106906387	fignl1	ENSPMEP00000014341	ENSPMEP00000032847	Uncharacterized protein; Belongs to the AAA ATPase family.	Fidgetin-like 1; Belongs to the AAA ATPase family.	0.582
LOC106906387	katnal2	ENSPMEP00000014341	ENSPMEP00000026844	Uncharacterized protein; Belongs to the AAA ATPase family.	Katanin p60 subunit A-like 2.	0.573
LOC106906387	psmc5	ENSPMEP00000014341	ENSPMEP00000007073	Uncharacterized protein; Belongs to the AAA ATPase family.	Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.	0.455
LOC106908053	LOC106920452	ENSPMEP00000025279	ENSPMEP00000004582	YME1-like 1b.	AAA domain-containing protein.	0.450
LOC106908053	LOC106927143	ENSPMEP00000025279	ENSPMEP00000020153	YME1-like 1b.	Si:ch1073-174d20.2.	0.442
LOC106908053	afg3l2	ENSPMEP00000025279	ENSPMEP00000026239	YME1-like 1b.	AFG3-like AAA ATPase 2.	0.448
LOC106908053	psmc6	ENSPMEP00000025279	ENSPMEP00000027229	YME1-like 1b.	Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family.	0.420
LOC106908053	spg7	ENSPMEP00000025279	ENSPMEP00000007697	YME1-like 1b.	SPG7 matrix AAA peptidase subunit, paraplegin.	0.437