STRINGSTRING
kxd1 kxd1 LOC106909031 LOC106909031 parp3 parp3 LOC106904547 LOC106904547 cops2 cops2 COPS6 COPS6 cops7a cops7a LOC106911418 LOC106911418 ino80d ino80d actr5 actr5 cops4 cops4 actr8 actr8 ddb1 ddb1 ino80b ino80b ENSPMEP00000010995 ENSPMEP00000010995 cul4a cul4a ino80c ino80c parp1 parp1 wdr76 wdr76 uba52 uba52 rpap3 rpap3 rad23a rad23a ENSPMEP00000014498 ENSPMEP00000014498 LOC106923389 LOC106923389 tfpt tfpt rbx1 rbx1 gps1 gps1 cops3 cops3 LOC106908123 LOC106908123 ddb2 ddb2 ino80 ino80 LOC106905490 LOC106905490 parp2 parp2 ruvbl1 ruvbl1 YY1 YY1 nfrkb nfrkb LOC106909028 LOC106909028 ENSPMEP00000021685 ENSPMEP00000021685 LOC106916471 LOC106916471 LOC106928565 LOC106928565 LOC106926030 LOC106926030 ino80e ino80e ENSPMEP00000023683 ENSPMEP00000023683 xpc xpc LOC106918268 LOC106918268 mcrs1 mcrs1 actb actb cops5 cops5 LOC106924837 LOC106924837 rps27a rps27a cops8 cops8 LOC106926029 LOC106926029 ENSPMEP00000030828 ENSPMEP00000030828 wbp1 wbp1 cul4b cul4b
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
kxd1KxDL motif containing 1. (186 aa)
LOC106909031Uncharacterized protein. (121 aa)
parp3Poly [ADP-ribose] polymerase. (522 aa)
LOC106904547RAD23 homolog B, nucleotide excision repair protein. (392 aa)
cops2COP9 signalosome subunit 2. (443 aa)
COPS6COP9 signalosome subunit 6. (316 aa)
cops7aCOP9 constitutive photomorphogenic homolog subunit 7A. (269 aa)
LOC106911418Uncharacterized protein; Belongs to the actin family. (142 aa)
ino80dINO80 complex subunit Da. (1007 aa)
actr5Actin related protein 5; Belongs to the actin family. (624 aa)
cops4COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis). (406 aa)
actr8Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. (644 aa)
ddb1Damage-specific DNA binding protein 1. (1139 aa)
ino80bINO80 complex subunit B. (339 aa)
ENSPMEP00000010995Uncharacterized protein. (230 aa)
cul4aCullin 4A; Belongs to the cullin family. (646 aa)
ino80cINO80 complex subunit C. (216 aa)
parp1Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (1015 aa)
wdr76WD repeat-containing protein 76; Specifically binds 5-hydroxymethylcytosine (5hmC), suggesting that it acts as a specific reader of 5hmC. Belongs to the WD repeat DDB2/WDR76 family. (589 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
rpap3RNA polymerase II associated protein 3. (637 aa)
rad23aRAD23 homolog A, nucleotide excision repair protein a. (382 aa)
ENSPMEP00000014498Si:cabz01080528.1. (599 aa)
LOC106923389Ubiquitin-like domain-containing protein. (77 aa)
tfptTCF3 (E2A) fusion partner. (199 aa)
rbx1Ring-box 1, E3 ubiquitin protein ligase. (108 aa)
gps1G protein pathway suppressor 1. (396 aa)
cops3COP9 signalosome subunit 3. (423 aa)
LOC106908123Uncharacterized protein. (375 aa)
ddb2Damage-specific DNA binding protein 2. (492 aa)
ino80INO80 complex ATPase subunit. (1038 aa)
LOC106905490MPN domain-containing protein. (276 aa)
parp2Poly [ADP-ribose] polymerase. (650 aa)
ruvbl1RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (456 aa)
YY1YY1 transcription factor b. (367 aa)
nfrkbNuclear factor related to kappaB binding protein. (1277 aa)
LOC106909028Uncharacterized protein. (375 aa)
ENSPMEP00000021685Uncharacterized protein; Belongs to the actin family. (224 aa)
LOC106916471Von Willebrand factor A domain containing 5B2. (1013 aa)
LOC106928565Si:ch73-290k24.6. (745 aa)
LOC106926030Uncharacterized protein. (166 aa)
ino80eINO80 complex subunit E. (231 aa)
ENSPMEP00000023683Uncharacterized protein; Belongs to the actin family. (202 aa)
xpcXeroderma pigmentosum, complementation group C. (930 aa)
LOC106918268YY1 transcription factor. (422 aa)
mcrs1Microspherule protein 1. (466 aa)
actbUncharacterized protein. (375 aa)
cops5COP9 signalosome subunit 5. (377 aa)
LOC106924837Centrin 4. (171 aa)
rps27aRibosomal protein S27a. (156 aa)
cops8COP9 signalosome subunit 8. (191 aa)
LOC106926029Uncharacterized protein. (177 aa)
ENSPMEP00000030828Ubiquitin-like domain-containing protein. (112 aa)
wbp1Uncharacterized protein. (483 aa)
cul4bCullin 4B; Belongs to the cullin family. (868 aa)
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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