STRINGSTRING
polr2c polr2c polr2a polr2a usp7 usp7 cops2 cops2 COPS6 COPS6 cops7a cops7a polr2d polr2d ercc6 ercc6 tcea1 tcea1 POLR2E POLR2E kxd1 kxd1 cops4 cops4 prpf19 prpf19 polr2g polr2g ENSPMEP00000008453 ENSPMEP00000008453 TCEANC TCEANC ddb1 ddb1 nrde2 nrde2 LOC106909638 LOC106909638 xab2 xab2 polr2b polr2b cul4a cul4a ppp1r42 ppp1r42 uba52 uba52 ercc3 ercc3 LOC106923389 LOC106923389 rbx1 rbx1 gps1 gps1 polr2f polr2f ppie ppie cops3 cops3 polr2j polr2j LOC106905490 LOC106905490 LOC106926528 LOC106926528 gtf2h3 gtf2h3 ZNF830 ZNF830 ercc2 ercc2 ccnh ccnh aqr aqr polr2h polr2h polr2i polr2i ercc8 ercc8 ENSPMEP00000026342 ENSPMEP00000026342 LOC106933455 LOC106933455 LOC106926296 LOC106926296 LOC106910274 LOC106910274 tceanc2 tceanc2 cops5 cops5 gtf2h4 gtf2h4 mnat1 mnat1 rps27a rps27a polr2l polr2l cops8 cops8 gtf2h5 gtf2h5 ENSPMEP00000030828 ENSPMEP00000030828 ENSPMEP00000031523 ENSPMEP00000031523 cdk7 cdk7 LOC106911701 LOC106911701 polr2k polr2k xpa xpa gtf2h1 gtf2h1 cul4b cul4b
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
polr2cPolymerase (RNA) II (DNA directed) polypeptide C. (275 aa)
polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1907 aa)
usp7Ubiquitin specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family. (1184 aa)
cops2COP9 signalosome subunit 2. (443 aa)
COPS6COP9 signalosome subunit 6. (316 aa)
cops7aCOP9 constitutive photomorphogenic homolog subunit 7A. (269 aa)
polr2dPolymerase (RNA) II (DNA directed) polypeptide D. (144 aa)
ercc6Excision repair cross-complementation group 6. (1446 aa)
tcea1Transcription elongation factor A (SII), 1. (311 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
kxd1KxDL motif containing 1. (186 aa)
cops4COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis). (406 aa)
prpf19Pre-mRNA processing factor 19. (505 aa)
polr2gPolymerase (RNA) II (DNA directed) polypeptide G-like. (172 aa)
ENSPMEP00000008453Uncharacterized protein. (154 aa)
TCEANCTranscription elongation factor A N-terminal and central domain containing. (321 aa)
ddb1Damage-specific DNA binding protein 1. (1139 aa)
nrde2NRDE-2, necessary for RNA interference, domain containing. (1205 aa)
LOC106909638High mobility group nucleosome binding domain 6. (97 aa)
xab2XPA binding protein 2. (849 aa)
polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
cul4aCullin 4A; Belongs to the cullin family. (646 aa)
ppp1r42Protein phosphatase 1, regulatory subunit 42. (291 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
ercc3Excision repair cross-complementation group 3. (780 aa)
LOC106923389Ubiquitin-like domain-containing protein. (77 aa)
rbx1Ring-box 1, E3 ubiquitin protein ligase. (108 aa)
gps1G protein pathway suppressor 1. (396 aa)
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
ppiePeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (301 aa)
cops3COP9 signalosome subunit 3. (423 aa)
polr2jPolymerase (RNA) II (DNA directed) polypeptide J. (117 aa)
LOC106905490MPN domain-containing protein. (276 aa)
LOC106926528Transcription elongation factor A (SII), 2. (319 aa)
gtf2h3General transcription factor IIH, polypeptide 3. (300 aa)
ZNF830Zinc finger protein 830. (335 aa)
ercc2Excision repair cross-complementation group 2. (739 aa)
ccnhCyclin H; Belongs to the cyclin family. (319 aa)
aqrAquarius intron-binding spliceosomal factor. (1471 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
ercc8Excision repair cross-complementation group 8. (401 aa)
ENSPMEP00000026342Uncharacterized protein. (652 aa)
LOC106933455E1A binding protein p300 b. (2290 aa)
LOC106926296Si:ch73-1a9.3. (79 aa)
LOC106910274General transcription factor IIH, polypeptide 2. (181 aa)
tceanc2Uncharacterized protein. (218 aa)
cops5COP9 signalosome subunit 5. (377 aa)
gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (421 aa)
mnat1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (311 aa)
rps27aRibosomal protein S27a. (156 aa)
polr2lPolymerase (RNA) II (DNA directed) polypeptide L. (67 aa)
cops8COP9 signalosome subunit 8. (191 aa)
gtf2h5General transcription factor IIH, polypeptide 5. (71 aa)
ENSPMEP00000030828Ubiquitin-like domain-containing protein. (112 aa)
ENSPMEP00000031523Transcription elongation factor A (SII), 3. (315 aa)
cdk7Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (360 aa)
LOC106911701General transcription factor IIH, polypeptide 2. (169 aa)
polr2kPolymerase (RNA) II (DNA directed) polypeptide K. (58 aa)
xpaXeroderma pigmentosum, complementation group A. (275 aa)
gtf2h1General transcription factor IIH, polypeptide 1. (550 aa)
cul4bCullin 4B; Belongs to the cullin family. (868 aa)
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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