(20 nodes) Importin-beta N-terminal domain network (Poecilia mexicana)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ipo5	Karyopherin (importin) beta 3. (1169 aa)
	tnpo1	Transportin 1. (890 aa)
	tnpo3	Transportin 3. (923 aa)
	LOC106933631	Exportin 1 (CRM1 homolog, yeast) a. (1066 aa)
	xpo7	Exportin 7. (1091 aa)
	IPO8	Importin 8. (991 aa)
	cse1l	CSE1 chromosome segregation 1-like (yeast). (971 aa)
	ipo9	Importin 9. (1003 aa)
	xpo6	Exportin 6. (1148 aa)
	xpo5	Exportin 5. (1221 aa)
	LOC106917575	Importin N-terminal domain-containing protein. (889 aa)
	LOC106922831	Si:ch73-182a11.2. (969 aa)
	ipo11	Importin 11. (975 aa)
	ipo4	Importin 4. (1090 aa)
	xpot	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. (971 aa)
	tnpo2	Transportin 2 (importin 3, karyopherin beta 2b). (890 aa)
	xpo1	Exportin 1 (CRM1 homolog, yeast) b. (1073 aa)
	ipo13	Importin 13. (1006 aa)
	ipo7	Importin 7. (1039 aa)
	ENSPMEP00000000351	Importin N-terminal domain-containing protein. (188 aa)

Your Current Organism:

Poecilia mexicana

NCBI taxonomy Id: 48701
Other names: shortfin molly

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPMEP00000000351	IPO8	ENSPMEP00000000351	ENSPMEP00000020344	Importin N-terminal domain-containing protein.	Importin 8.	0.885
ENSPMEP00000000351	LOC106917575	ENSPMEP00000000351	ENSPMEP00000011836	Importin N-terminal domain-containing protein.	Importin N-terminal domain-containing protein.	0.530
ENSPMEP00000000351	LOC106933631	ENSPMEP00000000351	ENSPMEP00000022600	Importin N-terminal domain-containing protein.	Exportin 1 (CRM1 homolog, yeast) a.	0.590
ENSPMEP00000000351	cse1l	ENSPMEP00000000351	ENSPMEP00000019568	Importin N-terminal domain-containing protein.	CSE1 chromosome segregation 1-like (yeast).	0.685
ENSPMEP00000000351	ipo11	ENSPMEP00000000351	ENSPMEP00000011122	Importin N-terminal domain-containing protein.	Importin 11.	0.505
ENSPMEP00000000351	ipo4	ENSPMEP00000000351	ENSPMEP00000011077	Importin N-terminal domain-containing protein.	Importin 4.	0.810
ENSPMEP00000000351	ipo5	ENSPMEP00000000351	ENSPMEP00000019162	Importin N-terminal domain-containing protein.	Karyopherin (importin) beta 3.	0.894
ENSPMEP00000000351	ipo7	ENSPMEP00000000351	ENSPMEP00000001634	Importin N-terminal domain-containing protein.	Importin 7.	0.885
ENSPMEP00000000351	ipo9	ENSPMEP00000000351	ENSPMEP00000018456	Importin N-terminal domain-containing protein.	Importin 9.	0.630
ENSPMEP00000000351	tnpo1	ENSPMEP00000000351	ENSPMEP00000034687	Importin N-terminal domain-containing protein.	Transportin 1.	0.530
ENSPMEP00000000351	tnpo2	ENSPMEP00000000351	ENSPMEP00000004743	Importin N-terminal domain-containing protein.	Transportin 2 (importin 3, karyopherin beta 2b).	0.530
ENSPMEP00000000351	tnpo3	ENSPMEP00000000351	ENSPMEP00000033902	Importin N-terminal domain-containing protein.	Transportin 3.	0.519
ENSPMEP00000000351	xpo1	ENSPMEP00000000351	ENSPMEP00000002804	Importin N-terminal domain-containing protein.	Exportin 1 (CRM1 homolog, yeast) b.	0.590
ENSPMEP00000000351	xpo5	ENSPMEP00000000351	ENSPMEP00000014389	Importin N-terminal domain-containing protein.	Exportin 5.	0.491
ENSPMEP00000000351	xpot	ENSPMEP00000000351	ENSPMEP00000004936	Importin N-terminal domain-containing protein.	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.	0.525
IPO8	ENSPMEP00000000351	ENSPMEP00000020344	ENSPMEP00000000351	Importin 8.	Importin N-terminal domain-containing protein.	0.885
IPO8	LOC106917575	ENSPMEP00000020344	ENSPMEP00000011836	Importin 8.	Importin N-terminal domain-containing protein.	0.592
IPO8	LOC106933631	ENSPMEP00000020344	ENSPMEP00000022600	Importin 8.	Exportin 1 (CRM1 homolog, yeast) a.	0.456
IPO8	ipo11	ENSPMEP00000020344	ENSPMEP00000011122	Importin 8.	Importin 11.	0.442
IPO8	ipo4	ENSPMEP00000020344	ENSPMEP00000011077	Importin 8.	Importin 4.	0.773