(73 nodes) Flavin adenine dinucleotide binding network (Acinetobacter soli)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APV35077.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (509 aa)
	mnmG	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. (626 aa)
	APV34915.1	Xanthine dehydrogenase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (499 aa)
	dusB	tRNA dihydrouridine synthase DusB; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the Dus family. DusB subfamily. (348 aa)
	APV34720.1	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)
	antC	Anthranilate dioxygenase reductase; Catalyzes the formation of catechol from anthranilate; Derived by automated computational analysis using gene prediction method: Protein Homology. (343 aa)
	lpdA	Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (477 aa)
	APV34603.1	Succinate dehydrogenase flavoprotein subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (631 aa)
	APV35024.1	4-hydroxyacetophenone monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (503 aa)
	APV37427.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (600 aa)
	APV37426.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (593 aa)
	APV37388.1	FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (433 aa)
	APV37273.1	Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (415 aa)
	APV37601.1	SfnB family sulfur acquisition oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (418 aa)
	APV37261.1	Magnesium/cobalt efflux protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (279 aa)
	APV37085.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (531 aa)
	dld	D-lactate dehydrogenase; Catalyzes the oxidation of D-lactate to pyruvate. Belongs to the quinone-dependent D-lactate dehydrogenase family. (567 aa)
	APV36967.1	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (340 aa)
	hpxO	Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (385 aa)
	APV36736.1	Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (393 aa)
	APV36673.1	Pyruvate oxidase; Catalyzes the formation of acetate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family. (573 aa)
	APV36610.1	FAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (469 aa)
	APV36579.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (607 aa)
	APV36548.1	Flavohemoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the globin family. (253 aa)
	APV36516.1	Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (496 aa)
	APV36515.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (390 aa)
	APV36482.1	Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (459 aa)
	mnmC	FAD-dependent cmnm(5)s(2)U34 oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. (623 aa)
	APV36446.1	Acetolactate synthase, large subunit, biosynthetic type; Derived by automated computational analysis using gene prediction method: Protein Homology. (574 aa)
	dusA	tRNA dihydrouridine(20/20a) synthase DusA; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily. (335 aa)
	APV36253.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (872 aa)
	dusC	tRNA-dihydrouridine synthase C; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs. Belongs to the Dus family. DusC subfamily. (310 aa)
	APV36109.1	Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (451 aa)
	APV36096.1	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)
	APV36093.1	Salicylate hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (382 aa)
	APV36086.1	FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (403 aa)
	APV36079.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family. (546 aa)
	APV36077.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (449 aa)
	betA	Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate. (552 aa)
	APV36022.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (440 aa)
	APV35989.1	Ubiquinone biosynthesis protein UbiH; Derived by automated computational analysis using gene prediction method: Protein Homology. (401 aa)
	APV35988.1	FAD-dependent monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (410 aa)
	APV35913.1	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (352 aa)
	APV35888.1	Alkyl hydroperoxide reductase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology. (519 aa)
	APV35758.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (401 aa)
	APV35757.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (430 aa)
	APV35748.1	Salicylate 1-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (422 aa)
	APV35736.1	NADH oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa)
	APV35675.1	SfnB family sulfur acquisition oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (407 aa)
	APV35674.1	SfnB family sulfur acquisition oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (403 aa)
	APV35633.1	Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (466 aa)
	murB	UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. (342 aa)
	APV35524.1	Nitrite reductase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (847 aa)
	APV35501.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (414 aa)
	APV35470.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (375 aa)
	APV35453.1	acyl-CoA dehydrogenase; Catalyzes the formation of 3-methylbut-2-enoyl CoA from 3-methylbutanoyl CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (390 aa)
	APV35404.1	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (318 aa)
	APV35398.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (389 aa)
	APV35385.1	Cyclohexanone monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (509 aa)
	APV35376.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (379 aa)
	APV35374.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0311 family. (179 aa)
	APV35371.1	4-hydroxybenzoate 3-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (404 aa)
	APV35356.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (600 aa)
	APV35348.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (384 aa)
	APV35317.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (406 aa)
	APV35274.1	Blue light sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (152 aa)
	APV35172.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (381 aa)
	APV35155.1	Alkyl hydroperoxide reductase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology. (519 aa)
	APV35144.1	Blue light sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (150 aa)
	APV35143.1	Blue light sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (155 aa)
	APV35126.1	NAD(P)(+) transhydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (471 aa)
	APV35124.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (832 aa)
	APV35080.1	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (523 aa)

Your Current Organism:

Acinetobacter soli

NCBI taxonomy Id: 487316
Other names: Acinetobacter soli Kim et al. 2009, Acinetobacter sp. Ba6, JCM 15062, KCTC 22184

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APV34720.1	APV35124.1	BEN76_01290	BEN76_03455	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.480
APV34720.1	APV35172.1	BEN76_01290	BEN76_03715	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.669
APV34720.1	APV35317.1	BEN76_01290	BEN76_04510	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.584
APV34720.1	APV35348.1	BEN76_01290	BEN76_04710	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.677
APV34720.1	APV35356.1	BEN76_01290	BEN76_04750	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.617
APV34720.1	APV35376.1	BEN76_01290	BEN76_04860	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.667
APV34720.1	APV35398.1	BEN76_01290	BEN76_04970	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.480
APV34720.1	APV35453.1	BEN76_01290	BEN76_05250	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Catalyzes the formation of 3-methylbut-2-enoyl CoA from 3-methylbutanoyl CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.682
APV34720.1	APV35470.1	BEN76_01290	BEN76_05335	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.735
APV34720.1	APV35501.1	BEN76_01290	BEN76_05500	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.480
APV34720.1	APV35674.1	BEN76_01290	BEN76_06445	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	SfnB family sulfur acquisition oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.480
APV34720.1	APV35675.1	BEN76_01290	BEN76_06450	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	SfnB family sulfur acquisition oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.480
APV34720.1	APV35757.1	BEN76_01290	BEN76_06885	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.716
APV34720.1	APV35758.1	BEN76_01290	BEN76_06890	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.652
APV34720.1	APV36109.1	BEN76_01290	BEN76_08800	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.480
APV34720.1	APV36515.1	BEN76_01290	BEN76_11030	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.648
APV34720.1	APV36579.1	BEN76_01290	BEN76_11355	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.617
APV34720.1	APV36610.1	BEN76_01290	BEN76_11520	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.598
APV34720.1	APV36736.1	BEN76_01290	BEN76_12220	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.480
APV34720.1	APV37273.1	BEN76_01290	BEN76_15205	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.480