STRINGSTRING
ADE40208.1 ADE40208.1 gmd gmd fcl-2 fcl-2 ADE39224.1 ADE39224.1 ADE39920.1 ADE39920.1 ADE39818.1 ADE39818.1 ADE40184.1 ADE40184.1 ADE39463.1 ADE39463.1 fcl fcl ADE39231.1 ADE39231.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ADE40208.1Polysaccharide biosynthesis protein CapD type. (640 aa)
gmdGDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (372 aa)
fcl-2NAD-dependent epimerase/dehydratase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. (325 aa)
ADE39224.1CDP-glucose 4,6-dehydratase. (355 aa)
ADE39920.1Short-chain dehydrogenase/reductase SDR. (244 aa)
ADE39818.1UDP-galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (329 aa)
ADE40184.1Putative nucleotide sugar epimerase. (340 aa)
ADE39463.1NAD-dependent epimerase/dehydratase. (294 aa)
fclNAD-dependent epimerase/dehydratase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. (314 aa)
ADE39231.1Hypothetical protein. (254 aa)
Your Current Organism:
Puniceispirillum marinum
NCBI taxonomy Id: 488538
Other names: C. Puniceispirillum marinum IMCC1322, Candidatus Puniceispirillum marinum IMCC1322, Candidatus Puniceispirillum marinum str. IMCC1322, Candidatus Puniceispirillum marinum strain IMCC1322, alpha proteobacterium IMCC1322
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