STRINGSTRING
SCX79740.1 SCX79740.1 SCX90584.1 SCX90584.1 SCY04349.1 SCY04349.1 SCY08371.1 SCY08371.1 SCY41584.1 SCY41584.1 SCY57701.1 SCY57701.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SCX79740.1PAS domain S-box-containing protein. (569 aa)
SCX90584.1Hypothetical protein. (595 aa)
SCY04349.1PAS domain S-box-containing protein. (1161 aa)
SCY08371.1PAS domain S-box-containing protein. (869 aa)
SCY41584.1PAS domain S-box-containing protein. (639 aa)
SCY57701.1PAS fold-containing protein. (254 aa)
Your Current Organism:
Flavobacterium caeni
NCBI taxonomy Id: 490189
Other names: CGMCC 1.7031, F. caeni, Flavobacteriaceae bacterium LM5, Flavobacterium caeni Liu et al. 2010 emend. Fujii et al. 2014, NBRC 104239, strain LM5
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