STRINGSTRING
TARUN_8282 TARUN_8282 TARUN_7475 TARUN_7475 TARUN_6518 TARUN_6518 TARUN_4774 TARUN_4774 TARUN_4787 TARUN_4787 TARUN_4426 TARUN_4426 TARUN_1815 TARUN_1815 TARUN_1376 TARUN_1376
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TARUN_8282Nadh dehydrogenase. (703 aa)
TARUN_7475Nad kinase associated with ferric reductase. (629 aa)
TARUN_6518Nadph dehydrogenase. (550 aa)
TARUN_4774PKS_ER domain-containing protein. (371 aa)
TARUN_4787Pyridine nucleotide-disulfide oxidoreductase, fad nadp-binding domain. (573 aa)
TARUN_4426Serine threonine kinase. (581 aa)
TARUN_1815Pyr_redox_2 domain-containing protein. (425 aa)
TARUN_1376Atp-nad kinase family. (444 aa)
Your Current Organism:
Trichoderma arundinaceum
NCBI taxonomy Id: 490622
Other names: BPI 878405, CBS 119575, T. arundinaceum, Trichoderma arundinaceum Zafari, Graf. & Samuels, 2008, Trichoderma sp. GJS-2007a
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