STRINGSTRING
TARUN_9541 TARUN_9541 TARUN_9543 TARUN_9543 TARUN_7769 TARUN_7769 TARUN_1929 TARUN_1929 TARUN_1584 TARUN_1584 TARUN_1337 TARUN_1337 TARUN_297 TARUN_297
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TARUN_9541Dihydrolipoyl dehydrogenase. (509 aa)
TARUN_9543Dihydrolipoamide succinyltransferase. (423 aa)
TARUN_77693-methyl-2-oxobutanoate dehydrogenase lipoamidee1 beta chain. (400 aa)
TARUN_19292-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3). (426 aa)
TARUN_1584Uncharacterized protein. (141 aa)
TARUN_13372-oxoglutarate dehydrogenase, mitochondrial. (1038 aa)
TARUN_297Mercuric reductase. (481 aa)
Your Current Organism:
Trichoderma arundinaceum
NCBI taxonomy Id: 490622
Other names: BPI 878405, CBS 119575, T. arundinaceum, Trichoderma arundinaceum Zafari, Graf. & Samuels, 2008, Trichoderma sp. GJS-2007a
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