STRINGSTRING
TARUN_7387 TARUN_7387 TARUN_6178 TARUN_6178 TARUN_2228 TARUN_2228
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TARUN_7387Beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. (459 aa)
TARUN_6178Glycoside hydrolase; Belongs to the glycosyl hydrolase 1 family. (258 aa)
TARUN_2228Glycoside hydrolase family 1; Belongs to the glycosyl hydrolase 1 family. (465 aa)
Your Current Organism:
Trichoderma arundinaceum
NCBI taxonomy Id: 490622
Other names: BPI 878405, CBS 119575, T. arundinaceum, Trichoderma arundinaceum Zafari, Graf. & Samuels, 2008, Trichoderma sp. GJS-2007a
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