Your Input: | |
| | rps8e | 30S ribosomal protein S8e. (128 aa) |
| | DKAM_0939 | DUF134 domain containing protein. (82 aa) |
| | DKAM_0962 | 30S ribosomal protein S25e. (88 aa) |
| | DKAM_0982 | Putative adenylyl cyclase CyaB; Adenylate cyclase, class 2. (193 aa) |
| | DKAM_0983 | Histone deacetylase superfamily. (344 aa) |
| | DKAM_0986 | Endonuclease IV. (288 aa) |
| | DKAM_0996 | Hypothetical protein. (105 aa) |
| | atpB | V-type ATPase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit. (467 aa) |
| | DKAM_1012 | UbiA prenyltransferase. (259 aa) |
| | DKAM_1032 | Transposase, IS605 OrfB family; Probably pseudogene. (124 aa) |
| | DKAM_1043 | IS element ISDka1 orfB, putative transposase. (429 aa) |
| | DKAM_1066 | Predicted methyltransferase. (333 aa) |
| | fen | Flap structure-specific endonuclease; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair [...] (363 aa) |
| | DKAM_1082 | RNA modification enzyme, MiaB family. (432 aa) |
| | DKAM_1085 | NMD protein affecting ribosome stability and mRNA decay-like protein. (356 aa) |
| | DKAM_1094 | Short-chain dehydrogenase/reductase SDR. (265 aa) |
| | rpl12 | 50S ribosomal protein L12P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the eukaryotic ribosomal protein P1/P2 family. (107 aa) |
| | rpl10 | Acidic ribosomal protein P0 - like protein; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (333 aa) |
| | rpl1 | 50S ribosomal protein L1P; Binds directly to 23S rRNA. Probably involved in E site tRNA release. (215 aa) |
| | rpl11 | 50S ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors; Belongs to the universal ribosomal protein uL11 family. (170 aa) |
| | DKAM_1107 | Probable signal recognition particle protein. (296 aa) |
| | rpl18a | 50S ribosomal protein LX. (86 aa) |
| | rpl31e | 50S ribosomal protein L31e; Belongs to the eukaryotic ribosomal protein eL31 family. (92 aa) |
| | rps19e | 30S ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family. (157 aa) |
| | nep1 | Probable ribosome biogenesis protein NEP1-like protein; Methyltransferase involved in ribosomal biogenesis. Specifically catalyzes the N1-methylation of the pseudouridine corresponding to position 914 in M.jannaschii 16S rRNA. (234 aa) |
| | DKAM_1125 | Primase. (598 aa) |
| | rbcL | Ribulose bisophosphate carboxylase; Catalyzes the addition of molecular CO(2) and H(2)O to ribulose 1,5-bisphosphate (RuBP), generating two molecules of 3- phosphoglycerate (3-PGA). Functions in an archaeal AMP degradation pathway, together with AMP phosphorylase and R15P isomerase. Belongs to the RuBisCO large chain family. Type III subfamily. (448 aa) |
| | truB | tRNA pseudouridine synthase; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 2 subfamily. (345 aa) |
| | rpl14e | 50S ribosomal protein L14e; Belongs to the eukaryotic ribosomal protein eL14 family. (96 aa) |
| | rpl34e | 50S ribosomal protein L34e; Belongs to the eukaryotic ribosomal protein eL34 family. (86 aa) |
| | rps5 | 30S ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy. (217 aa) |
| | rpl18 | 50S ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (196 aa) |
| | rpl19e | 50S ribosomal protein L19e; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL19 family. (152 aa) |
| | DKAM_1158 | 50S ribosomal protein L32e. (123 aa) |
| | rpl6 | 50S ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (184 aa) |
| | rps8 | 30S ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (133 aa) |
| | rps14 | 30S ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles. (54 aa) |
| | rpl5 | 50S ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. May contact the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (189 aa) |
| | rps4e | 30S ribosomal protein S4e; Belongs to the eukaryotic ribosomal protein eS4 family. (252 aa) |
| | rpl24 | 50S ribosomal protein L24P; Located at the polypeptide exit tunnel on the outside of the subunit. (133 aa) |
| | rpl14 | 50S ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (142 aa) |
| | rps17 | 30S ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (116 aa) |
| | rpl29 | 50S ribosomal protein L29P; Belongs to the universal ribosomal protein uL29 family. (81 aa) |
| | rps3 | 30S ribosomal protein S3P; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family. (223 aa) |
| | rpl22 | 50S ribosomal protein L22P; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. (157 aa) |
| | rps19p | 30S ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (147 aa) |
| | DKAM_1173 | ATPase associated with various cellular activities, AAA_5; COG0714 MoxR-like ATPases. (305 aa) |
| | rpl23 | 50S ribosomal protein L23P; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family. (87 aa) |
| | rpl3 | 50S ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. (396 aa) |
| | DKAM_1178 | DUF171 domain containing protein; Pfam02598, DUF171, Uncharacterized ACR, COG2106. (276 aa) |
| | DKAM_1192 | Protein of unknown function DUF701, zinc-binding putative. (119 aa) |
| | DKAM_1201 | H+-transporting ATPase related protein. (777 aa) |
| | DKAM_1208 | SufBD protein; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component. (257 aa) |
| | DKAM_1209 | 30S ribosomal protein S25e. (86 aa) |
| | DKAM_1212 | tRNA intron endonuclease, catalytic-like protein. (178 aa) |
| | radA | DNA repair and recombination protein radA; Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules. (328 aa) |
| | top6A | Type 2 DNA topoisomerase VI subunit A; Relaxes both positive and negative superturns and exhibits a strong decatenase activity; Belongs to the TOP6A family. (433 aa) |
| | DKAM_1220 | Probable bis(5'-adenosyl)-triphosphatase, HIT family. (167 aa) |
| | DKAM_1229 | COG1061 DNA or RNA helicases of superfamily II; pfam04851, ResIII, Type III restriction enzyme, res subunit. (553 aa) |
| | albA | DNA/RNA-binding protein Alba 1; Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes; Belongs to the histone-like Alba family. (87 aa) |
| | DKAM_1234 | DNA/RNA-binding protein Alba 2. (91 aa) |
| | DKAM_1244 | IS element ISDka1 orfB, putative transposase; C-terminal shortening, may be pseudogene. (325 aa) |
| | rps17e | 30S ribosomal protein S17e; Belongs to the eukaryotic ribosomal protein eS17 family. (72 aa) |
| | tgtA | tRNA-guanine transglycosylase, various specificities; Exchanges the guanine residue with 7-cyano-7-deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D-loop) of archaeal tRNAs; Belongs to the archaeosine tRNA-ribosyltransferase family. (520 aa) |
| | tfe | Transcription factor TFIIE, alpha subunit; Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing elongatio [...] (159 aa) |
| | DKAM_1269 | Predicted transcription factor; Similar to eukaryotic MBF1. (166 aa) |
| | DKAM_1273 | Hypothetical protein. (905 aa) |
| | DKAM_1284 | Small GTP-binding protein. (338 aa) |
| | DKAM_1291 | COG2016 Predicted RNA-binding protein (contains PUA domain); smart00359, PUA, Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase. (159 aa) |
| | dnaG | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome. (408 aa) |
| | DKAM_1295 | COG0417 DNA polymerase elongation subunit (family B); pfam00136, DNA_pol_B, DNA polymerase family B; pfam03104, DNA_pol_B_exo, DNA polymerase family B, exonuclease domain; smart00486, POLBc, DNA polymerase type-B family; DNA polymerase alpha, delta, epsilon and zeta chain (eukaryota), DNA polymerases in archaea. (797 aa) |
| | DKAM_1302 | 30S ribosomal protein S26e. (95 aa) |
| | DKAM_1314 | COG0417 DNA polymerase elongation subunit (family B); pfam00136, DNA_pol_B, DNA polymerase family B; pfam03104, DNA_pol_B_exo, DNA polymerase family B, exonuclease domain; smart00486, POLBc, DNA polymerase type-B family; DNA polymerase alpha, delta, epsilon and zeta chain (eukaryota), DNA polymerases in archaea. (856 aa) |
| | DKAM_1316 | COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing. (425 aa) |
| | DKAM_1321 | Probable brix domain-containing ribosomal biogenesis protein; Probably involved in the biogenesis of the ribosome. (177 aa) |
| | rpl37ae | 50S ribosomal protein L37Ae. (86 aa) |
| | DKAM_1326 | Shwachman-Bodian-Diamond syndrome protein - like protein. (231 aa) |
| | rpl15e | 50S ribosomal protein L15e; Belongs to the eukaryotic ribosomal protein eL15 family. (220 aa) |
| | rps3ae | 30S ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family. (213 aa) |
| | rps15 | 30S ribosomal protein S15P/S13e. (166 aa) |
| | rps24e | 30S ribosomal protein S24e; Belongs to the eukaryotic ribosomal protein eS24 family. (114 aa) |
| | rps6e | 30S ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family. (221 aa) |
| | rpl24e | 50S ribosomal protein L24e; Binds to the 23S rRNA. (72 aa) |
| | rps28e | 30S ribosomal protein S28e; Belongs to the eukaryotic ribosomal protein eS28 family. (90 aa) |
| | fni | Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). (390 aa) |
| | rps2 | 30S ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. (215 aa) |
| | rps9 | 30S ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family. (140 aa) |
| | rpl18e | 50S ribosomal protein L18e; Belongs to the eukaryotic ribosomal protein eL18 family. (120 aa) |
| | DKAM_1365 | 30S ribosomal protein S4P. (147 aa) |
| | rps13 | 30S ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement; Belongs to the universal ribosomal protein uS13 family. (174 aa) |
| | rps10 | 30S ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (112 aa) |
| | rps7 | 30S ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center; Belongs to the universal ribosomal protein uS7 family. (198 aa) |
| | rps12 | 30S ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family. (148 aa) |
| | rpl30e | 50S ribosomal protein L30e; Belongs to the eukaryotic ribosomal protein eL30 family. (104 aa) |
| | cdc6 | Cell division control protein 6 - like protein, cdc6; Involved in regulation of DNA replication. (394 aa) |
| | pckG | Phosphoenolpyruvate carboxykinase; Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle. (636 aa) |
| | DKAM_1384 | Predicted nucleotide kinase; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Belongs to the adenylate kinase family. AK6 subfamily. (193 aa) |
| | DKAM_1385 | GTP-binding protein, HSR1-related; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. (280 aa) |
| | DKAM_1400 | COG1672 Predicted ATPase (AAA+ superfamily). (370 aa) |
| | DKAM_1401 | Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). (262 aa) |
| | DKAM_1402 | 3-ketoacyl-(acyl-carrier-protein) reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). (37 aa) |
| | DKAM_1405 | COG0030 Dimethyladenosine transferase (rRNA methylation); Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (278 aa) |
| | rpl21e | 50S ribosomal protein L21e; Belongs to the eukaryotic ribosomal protein eL21 family. (108 aa) |
| | rpl10e | 50S ribosomal protein L10e; Belongs to the universal ribosomal protein uL16 family. (178 aa) |
| | priS | Probable DNA primase small subunit; Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer sy [...] (374 aa) |
| | nop10 | Nucleolar RNA-binding protein Nop10p; Involved in ribosome biogenesis; more specifically in 18S rRNA pseudouridylation and in cleavage of pre-rRNA. (66 aa) |
| | DKAM_1425 | COG1287 Uncharacterized membrane protein, required for N-linked glycosylation; pfam02516, STT3, Oligosaccharyl transferase STT3 subunit. (668 aa) |
| | DKAM_1427 | Cell division control protein 6 - like protein, cdc6; Involved in regulation of DNA replication. (414 aa) |
| | DKAM_1437 | KEGG: peptidase S26B, signal peptidase. (152 aa) |
| | DKAM_1461 | COG5491 Conserved protein implicated in secretion. (207 aa) |
| | DKAM_1469 | AMMECR1 domain protein. (226 aa) |
| | DKAM_1474 | IS element ISDka1 orfB, putative transposase. (432 aa) |
| | DKAM_0923 | Hypothetical protein. (83 aa) |
| | DKAM_0918 | Aspartate/serine transaminase; Pfam00266, Aminotran_5, Aminotransferase class-V; COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase. (381 aa) |
| | priL | DNA primase, large subunit; Regulatory subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Stabilizes and modulates the activity of the small subunit, increasing the rate of DNA synthesis, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair. (381 aa) |
| | rpl44e | 50S ribosomal protein L44e; Binds to the 23S rRNA. (75 aa) |
| | DKAM_0885 | Signal peptidase type I. (386 aa) |
| | DKAM_0862 | 50S ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family. (58 aa) |
| | DKAM_0858 | ParB domain protein nuclease. (255 aa) |
| | DKAM_0856 | ferredoxin--NADP(+) reductase subunit alpha. (72 aa) |
| | DKAM_0843 | Hypothetical protein. (227 aa) |
| | DKAM_0841 | UPF0047 domain containing protein. (141 aa) |
| | DKAM_0834 | Cation efflux system protein; COG0053 Predicted Co/Zn/Cd cation transporters. (315 aa) |
| | DKAM_0815 | Pre-mRNA processing ribonucleoprotein, binding region. (421 aa) |
| | flpA | Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase; Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA; Belongs to the methyltransferase superfamily. Fibrillarin family. (237 aa) |
| | DKAM_0765 | Metal-dependent phosphohydrolase, HD region. (517 aa) |
| | DKAM_0761 | Anion transporter. (237 aa) |
| | DKAM_0760 | Anion transporter. (242 aa) |
| | DKAM_0754 | DEAD/DEAH box helicase domain protein. (762 aa) |
| | DKAM_0720 | hydroxymethylglutaryl-CoA reductase, degradative; Belongs to the HMG-CoA reductase family. (427 aa) |
| | hel308 | DEAD/DEAH box helicase domain protein; DNA-dependent ATPase and 3'-5' DNA helicase that may be involved in repair of stalled replication forks. (717 aa) |
| | rfcL | Replication factor C large subunit; Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA; Belongs to the activator 1 small subunits family. RfcL subfamily. (426 aa) |
| | rfcS | Replication factor C small subunit; Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA; Belongs to the activator 1 small subunits family. RfcS subfamily. (326 aa) |
| | DKAM_0684 | Cation transport ATPase. (894 aa) |
| | DKAM_0682 | IS element ISDka2 orfB. (437 aa) |
| | DKAM_0667 | ATPase associated with various cellular activities, AAA_5. (373 aa) |
| | DKAM_0663 | Single-strand DNA-binding protein. (158 aa) |
| | taw1 | Wyosine base formation; Component of the wyosine derivatives biosynthesis pathway that catalyzes the condensation of N-methylguanine with 2 carbon atoms from pyruvate to form the tricyclic 4-demethylwyosine (imG-14) on guanosine-37 of tRNA(Phe). (364 aa) |
| | DKAM_0627 | Cation efflux protein; COG0053 Predicted Co/Zn/Cd cation transporters. (261 aa) |
| | DKAM_0613 | DNA double-strand break repair protein mre11; COG0420 DNA repair exonuclease. (427 aa) |
| | DKAM_0610 | DNA double-strand break repair rad50 ATPase; SMC domain protein. (818 aa) |
| | DKAM_0605 | Metal dependent phosphohydrolase. (553 aa) |
| | DKAM_0600 | Linocin_M18 bacteriocin protein. (357 aa) |
| | DKAM_0594 | COG0714 MoxR-like ATPases; pfam07728, AAA_5, ATPase family associated with various cellular activities (AAA). (317 aa) |
| | DKAM_0585 | Putative uncharacterized protein; Pfam03657, UPF0113, Uncharacterised protein family (UPF0113). (173 aa) |
| | DKAM_0575 | COG2453 Predicted protein-tyrosine phosphatase; pfam00782, DSPc, Dual specificity phosphatase, catalytic domain. (281 aa) |
| | DKAM_0557 | IS element ISDka1 orfB, putative transposase; Probably pseudogene. (246 aa) |
| | DKAM_0553 | Dinitrogenase iron-molybdenum cofactor biosynthesis protein; COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; pfam02579, Nitro_FeMo-Co, Dinitrogenase iron-molybdenum cofactor. (124 aa) |
| | DKAM_0544 | Asparaginase. (353 aa) |
| | rnz | Beta-lactamase domain protein; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. (249 aa) |
| | DKAM_0503 | Hypothetical protein. (85 aa) |
| | DKAM_0485 | Pfam01555, N6_N4_Mtase, DNA methylase; COG0863 DNA modification methylase. (317 aa) |
| | pdxS | Pyridoxal biosynthesis lyase pdxS; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family. (335 aa) |
| | DKAM_0477 | Orotidine-5'-phosphate decarboxylase, PyrF. (224 aa) |
| | DKAM_0475 | Probable dihydroorotate dehydrogenase electron transfer subunit; COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases. (256 aa) |
| | DKAM_0448 | Stomatin/prohibitin - like protein; COG0330 Membrane protease subunits, stomatin/prohibitin homologs; pfam01145, Band_7, SPFH domain / Band 7 family. (262 aa) |
| | DKAM_0446 | MoxR-related ATPase, AAA superfamily; K03924 MoxR-like ATPase; COG0714 MoxR-like ATPases; pfam07726, AAA_3, ATPase family associated with various cellular activities (AAA). (329 aa) |
| | DKAM_0441 | NADH:polysulfide oxidoreductase; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases. (470 aa) |
| | DKAM_0439 | IS element ISDka1 orfB, putative transposase. (429 aa) |
| | DKAM_0434 | Pfam01889, DUF63, Membrane protein of unknown function DUF63. (313 aa) |
| | DKAM_0433 | Protease; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain. (312 aa) |
| | DKAM_0390 | 3-hydroxy-3-methylglutaryl CoA synthase; Belongs to the thiolase-like superfamily. UPF0219 family. (352 aa) |
| | DKAM_0389 | Protein of unknown function DUF35; K07068. (140 aa) |
| | DKAM_0388 | K00021 3-hydroxy-3-methylglutaryl-CoA reductase. (253 aa) |
| | DKAM_0356 | Transmembrane electron transport protein; COG0785 Cytochrome c biogenesis protein. (192 aa) |
| | DKAM_0355 | Hypothetical protein. (204 aa) |
| | DKAM_0352 | Glycosyl transferase, group 1; K00703 starch synthase; COG0297 Glycogen synthase. (518 aa) |
| | panB | 3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family. (271 aa) |
| | DKAM_0333 | Transposase, IS605 OrfB family; Probably pseudogene. (98 aa) |
| | DKAM_0329 | Endonuclease III; HhH-GPD family protein; K01741 DNA-(apurinic or apyrimidinic site) lyase; COG0177 Predicted EndoIII-related endonuclease. (238 aa) |
| | DKAM_0328 | Methyltransferase; COG2520 Predicted methyltransferase. (286 aa) |
| | DKAM_0318 | Transport protein; COG1055 Na+/H+ antiporter NhaD and related arsenite permeases. (428 aa) |
| | glyA | Glycine/serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with a modified folate serving as the one-carbon carrier. Also exhibits a pteridine-independent aldolase activity toward beta- hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (448 aa) |
| | lig | ATP-dependent DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair. (610 aa) |
| | tbp | Transcription factor - TATA-box-binding protein; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation. (194 aa) |
| | DKAM_0274 | Putative cation efflux system protein; Pfam01545, Cation_efflux, Cation efflux family; COG0053 Predicted Co/Zn/Cd cation transporters. (292 aa) |
| | DKAM_0246 | IS element ISDka1 orfB, putative transposase. (429 aa) |
| | DKAM_0238 | Radical SAM domain protein; COG0731 Fe-S oxidoreductases. (310 aa) |
| | DKAM_0224 | Pfam03367, zf-ZPR1, ZPR1 zinc-finger domain. (182 aa) |
| | DKAM_0201 | Predicted hydrolase (HAD superfamily). (242 aa) |
| | DKAM_0195 | formyl-CoA transferase. (392 aa) |
| | DKAM_0006 | FeS assembly protein SufB. (468 aa) |
| | tmcA | Predicted P-loop ATPase fused to an acetyltransferase; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP). (814 aa) |
| | ubiX | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (195 aa) |
| | DKAM_0047 | tRNA-splicing endonuclease. (98 aa) |
| | DKAM_0059 | Threonyl/alanyl tRNA synthetase. (235 aa) |
| | DKAM_0080 | Hypothetical protein. (389 aa) |
| | DKAM_0099 | Ferredoxin:NADP oxidoreductase, beta subunit. (269 aa) |
| | DKAM_0106 | Exonuclease of the beta-lactamase fold involved in RNA processing-like protein. (362 aa) |
| | DKAM_0113 | Citrate transporter. (482 aa) |
| | DKAM_0114 | IS element ISDka1 orfB, putative transposase. (404 aa) |
| | DKAM_0127 | Iron-containing alcohol dehydrogenase. (392 aa) |
| | DKAM_0135 | Hypothetical protein. (178 aa) |
| | DKAM_0136 | Oligosaccharyl transferase subunit, putative. (818 aa) |
| | DKAM_0145 | Putative GTPase or GTP-binding protein. (397 aa) |
| | DKAM_0147 | AAA ATPase. (206 aa) |
| | DKAM_0190 | Putative Na+/H+ antiporter. (386 aa) |
| | DKAM_0149 | SufBD protein; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component. (407 aa) |
| | DKAM_0152 | Glycosyl transferase, family 2. (470 aa) |
| | DKAM_0159 | Geranylgeranyl reductase. (456 aa) |
| | DKAM_0174 | Hypothetical protein. (333 aa) |
| | DKAM_0188 | Aminopeptidases-like protein. (545 aa) |
| | DKAM_0002 | Putative dehydrogenase (flavoprotein), FixC. (381 aa) |
| | DKAM_0005 | ABC transporter, membrane component. (337 aa) |
