STRINGSTRING
Aflv_1305 Aflv_1305 Aflv_1306 Aflv_1306 rbsB rbsB yesM yesM yesN yesN rbsB-2 rbsB-2 rbsA rbsA rbsC rbsC menC menC Aflv_1314 Aflv_1314 Aflv_1315 Aflv_1315 Aflv_1316 Aflv_1316 rbsB-3 rbsB-3 rbsA-2 rbsA-2 rbsC-2 rbsC-2 rbsB-5 rbsB-5 rbsC-4 rbsC-4 rbsA-3 rbsA-3 rbsD rbsD rbsK rbsK rbsR rbsR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Aflv_1305Transposase. (453 aa)
Aflv_1306Predicted protein. (56 aa)
rbsBABC-type sugar transport system, periplasmic component; Contains N-terminal Xre family HTH domain. (332 aa)
yesMSignal transduction histidine kinase. (479 aa)
yesNDNA-binding response regulator (contains REC and AraC-type DNA-binding domain). (428 aa)
rbsB-2ABC-type ribose transport system, periplasmic component. (360 aa)
rbsAABC-type ribose transport system, ATPase component; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family. (517 aa)
rbsCABC-type ribose transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. (389 aa)
menCO-succinylbenzoate-CoA synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). (380 aa)
Aflv_1314Uncharacterized conserved protein. (170 aa)
Aflv_1315Uncharacterized protein conserved in bacteria, Cys rich. (86 aa)
Aflv_1316Uncharacterized conserved protein; Similar to DnaA N-terminal domain. (144 aa)
rbsB-3ABC-type sugar transport system, periplasmic component. (370 aa)
rbsA-2ABC-type sugar transport system, ATPase component. (497 aa)
rbsC-2ABC-type sugar transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. (319 aa)
rbsB-5ABC-type ribose transport system, periplasmic component, contains N-terminal xre family HTH domain. (309 aa)
rbsC-4ABC-type ribose transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. (320 aa)
rbsA-3ABC-type ribose transport system, ATPase component; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (496 aa)
rbsDABC-type ribose transport system, auxiliary component; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. (134 aa)
rbsKRibokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. (294 aa)
rbsRTranscriptional regulator, LacI family (HTH and periplasmic-binding domains). (329 aa)
Your Current Organism:
Anoxybacillus flavithermus
NCBI taxonomy Id: 491915
Other names: A. flavithermus WK1, Anoxybacillus flavithermus WK1, Anoxybacillus flavithermus str. WK1, Anoxybacillus flavithermus strain WK1
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