Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OSI06652.1 | baeS | BWD07_12395 | BWD07_08400 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.981 |
| OSI06652.1 | cheY | BWD07_12395 | BWD07_04245 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.809 |
| OSI06652.1 | frzE | BWD07_12395 | BWD07_04250 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.634 |
| OSI06652.1 | kinA | BWD07_12395 | BWD07_08210 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.870 |
| OSI06652.1 | ntrX | BWD07_12395 | BWD07_11105 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.413 |
| OSI06652.1 | qseC | BWD07_12395 | BWD07_01060 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.917 |
| OSI06652.1 | vraR | BWD07_12395 | BWD07_08600 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.552 |
| OSI06652.1 | walK | BWD07_12395 | BWD07_11110 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.717 |
| OSI06652.1 | zraR_1 | BWD07_12395 | BWD07_08215 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.417 |
| OSI06652.1 | zraR_2 | BWD07_12395 | BWD07_09870 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sigma-54-dependent Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.714 |
| OSI09904.1 | def | BWD07_11115 | BWD07_11130 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.745 |
| OSI09904.1 | fmt | BWD07_11115 | BWD07_11125 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.809 |
| OSI09904.1 | ntrX | BWD07_11115 | BWD07_11105 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.885 |
| OSI09904.1 | rsmB_1 | BWD07_11115 | BWD07_11120 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 16S rRNA (cytosine(967)-C(5))-methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.825 |
| OSI09904.1 | walK | BWD07_11115 | BWD07_11110 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.917 |
| OSI12657.1 | cheY | BWD07_04240 | BWD07_04245 | Chemotaxis protein CheX; Derived by automated computational analysis using gene prediction method: Protein Homology. | Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.937 |
| OSI12657.1 | frzE | BWD07_04240 | BWD07_04250 | Chemotaxis protein CheX; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.952 |
| OSI12657.1 | zraR_1 | BWD07_04240 | BWD07_08215 | Chemotaxis protein CheX; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.403 |
| OSI13356.1 | baeS | BWD07_00120 | BWD07_08400 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.812 |
| OSI13356.1 | kinA | BWD07_00120 | BWD07_08210 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.933 |
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