(5 nodes) Polyamine transport, and ABC-type polyamine transporter activity network (Neisseria canis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	potF_2	Polyamine ABC transporter substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family. (380 aa)
	potA	Polyamine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (372 aa)
	potH	Putrescine/spermidine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (322 aa)
	ydcV	Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (297 aa)
	potD-1	Polyamine ABC transporter substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family. (380 aa)

Your Current Organism:

Neisseria canis

NCBI taxonomy Id: 493
Other names: ATCC 14687, CIP 103347, LMG 8383, LMG:8383, N. canis, NCTC 10296, strain H 6

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
potA	potD-1	BWD07_08560	BWD07_10245	Polyamine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	Polyamine ABC transporter substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	0.991
potA	potF_2	BWD07_08560	BWD07_02820	Polyamine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	Polyamine ABC transporter substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	0.991
potA	potH	BWD07_08560	BWD07_08565	Polyamine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	Putrescine/spermidine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
potA	ydcV	BWD07_08560	BWD07_08570	Polyamine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
potD-1	potA	BWD07_10245	BWD07_08560	Polyamine ABC transporter substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	Polyamine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	0.991
potD-1	potF_2	BWD07_10245	BWD07_02820	Polyamine ABC transporter substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	Polyamine ABC transporter substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	0.928
potD-1	potH	BWD07_10245	BWD07_08565	Polyamine ABC transporter substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	Putrescine/spermidine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
potD-1	ydcV	BWD07_10245	BWD07_08570	Polyamine ABC transporter substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
potF_2	potA	BWD07_02820	BWD07_08560	Polyamine ABC transporter substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	Polyamine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	0.991
potF_2	potD-1	BWD07_02820	BWD07_10245	Polyamine ABC transporter substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	Polyamine ABC transporter substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	0.928
potF_2	potH	BWD07_02820	BWD07_08565	Polyamine ABC transporter substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	Putrescine/spermidine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
potF_2	ydcV	BWD07_02820	BWD07_08570	Polyamine ABC transporter substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
potH	potA	BWD07_08565	BWD07_08560	Putrescine/spermidine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyamine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	0.999
potH	potD-1	BWD07_08565	BWD07_10245	Putrescine/spermidine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyamine ABC transporter substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	0.993
potH	potF_2	BWD07_08565	BWD07_02820	Putrescine/spermidine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyamine ABC transporter substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	0.993
potH	ydcV	BWD07_08565	BWD07_08570	Putrescine/spermidine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ydcV	potA	BWD07_08570	BWD07_08560	Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyamine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	0.999
ydcV	potD-1	BWD07_08570	BWD07_10245	Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyamine ABC transporter substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	0.999
ydcV	potF_2	BWD07_08570	BWD07_02820	Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyamine ABC transporter substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	0.999
ydcV	potH	BWD07_08570	BWD07_08565	Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Putrescine/spermidine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999