STRINGSTRING
emrB emrB mlaD mlaD yajR yajR bcr bcr ampG ampG ynfM ynfM hsrA hsrA lplT lplT OSI12897.1 OSI12897.1 ndk ndk OSI12008.1 OSI12008.1 yfkJ yfkJ etp etp ribD ribD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
emrBMFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (440 aa)
mlaDOuter membrane lipid asymmetry maintenance protein MlaD; Derived by automated computational analysis using gene prediction method: Protein Homology. (170 aa)
yajRHypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (460 aa)
bcrBcr/CflA family drug resistance efflux transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (405 aa)
ampGMFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (510 aa)
ynfMMFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (386 aa)
hsrAHypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)
lplTHypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (435 aa)
OSI12897.1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (533 aa)
ndkNucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. (141 aa)
OSI12008.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (120 aa)
yfkJProtein-tyrosine-phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (156 aa)
etpPhosphotyrosine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (144 aa)
ribDRiboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. (368 aa)
Your Current Organism:
Neisseria canis
NCBI taxonomy Id: 493
Other names: ATCC 14687, CIP 103347, LMG 8383, LMG:8383, N. canis, NCTC 10296, strain H 6
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