STRINGSTRING
ackA_2 ackA_2 BWD07_11100 BWD07_11100 OSI09163.1 OSI09163.1 accD accD pdhD pdhD ldhA ldhA adh adh mmsA mmsA accB accB accC accC OSI12864.1 OSI12864.1 OSI12811.1 OSI12811.1 BWD07_04035 BWD07_04035 yfeX yfeX OSI12656.1 OSI12656.1 lpdA lpdA OSI12692.1 OSI12692.1 OSI06631.1 OSI06631.1 OSI06633.1 OSI06633.1 BWD07_12280 BWD07_12280 OSI06828.1 OSI06828.1 OSI07469.1 OSI07469.1 OSI12405.1 OSI12405.1 ackA_1 ackA_1 accA accA OSI12101.1 OSI12101.1 ldcA ldcA BWD07_08440 BWD07_08440 acnB acnB OSI11759.1 OSI11759.1 pta pta OSI11649.1 OSI11649.1 prpF prpF OSI11679.1 OSI11679.1 acnA acnA prpC prpC prpB_2 prpB_2 pcaF pcaF OSI11343.1 OSI11343.1 lpd lpd efeB efeB OSI10351.1 OSI10351.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ackA_2Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (398 aa)
BWD07_11100Sugar-binding protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (197 aa)
OSI09163.1IS30 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)
accDacetyl-CoA carboxylase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. (289 aa)
pdhDDihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (481 aa)
ldhAL-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. (318 aa)
adhAlcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (361 aa)
mmsAMethylmalonate-semialdehyde dehydrogenase (CoA acylating); Derived by automated computational analysis using gene prediction method: Protein Homology. (499 aa)
accBacetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (151 aa)
accCacetyl-CoA carboxylase biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (452 aa)
OSI12864.1IS30 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)
OSI12811.1IS30 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)
BWD07_04035IS30 family transposase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)
yfeXPeroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (303 aa)
OSI12656.1IS30 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)
lpdADihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (596 aa)
OSI12692.1IS30 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)
OSI06631.1IS30 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (93 aa)
OSI06633.1IS30 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (54 aa)
BWD07_12280NosX protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (154 aa)
OSI06828.1IS30 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (169 aa)
OSI07469.1IS30 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa)
OSI12405.1IS30 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)
ackA_1Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (417 aa)
accAacetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (319 aa)
OSI12101.1IS30 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa)
ldcALD-carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (396 aa)
BWD07_08440DDE transposase; Frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa)
acnBBifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aconitase/IPM isomerase family. (861 aa)
OSI11759.1IS30 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (197 aa)
ptaPhosphate acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (493 aa)
OSI11649.1IS30 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)
prpFPutative methylaconitate Delta-isomerase PrpF; Derived by automated computational analysis using gene prediction method: Protein Homology. (388 aa)
OSI11679.1IS30 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (84 aa)
acnAFe/S-dependent 2-methylisocitrate dehydratase AcnD; Derived by automated computational analysis using gene prediction method: Protein Homology. (868 aa)
prpC2-methylcitrate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the citrate synthase family. (384 aa)
prpB_2Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family. (293 aa)
pcaF3-oxoadipyl-CoA thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (402 aa)
OSI11343.1IS30 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)
lpdDihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (477 aa)
efeBPeroxidase; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. (423 aa)
OSI10351.1IS30 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (271 aa)
Your Current Organism:
Neisseria canis
NCBI taxonomy Id: 493
Other names: ATCC 14687, CIP 103347, LMG 8383, LMG:8383, N. canis, NCTC 10296, strain H 6
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