Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BUD28 | YGL217C | YLR062C | YGL217C | Putative uncharacterized protein BUD28; Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; 98% of ORF overlaps the verified gene RPL22A; diploid mutant displays a weak budding pattern phenotype in a systematic assay. | Putative uncharacterized protein YGL217C; Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF KIP3/YGL216W. | 0.906 |
| BUD28 | YLR125W | YLR062C | YLR125W | Putative uncharacterized protein BUD28; Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; 98% of ORF overlaps the verified gene RPL22A; diploid mutant displays a weak budding pattern phenotype in a systematic assay. | Putative protein of unknown function; mutant has decreased Ty3 transposition; YLR125W is not an essential gene. | 0.836 |
| BUD28 | YMR182W-A | YLR062C | YMR182W-A | Putative uncharacterized protein BUD28; Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; 98% of ORF overlaps the verified gene RPL22A; diploid mutant displays a weak budding pattern phenotype in a systematic assay. | Uncharacterized protein YMR182W-A; Putative protein of unknown function. | 0.791 |
| GTO3 | YOL024W | YMR251W | YOL024W | Glutathione S-transferase omega-like 3; Omega class glutathione transferase; putative cytosolic localization. | Putative protein of unknown function; predicted to have thiol-disulfide oxidoreductase active site; YOL024W has a paralog, IGD1, that arose from the whole genome duplication. | 0.489 |
| MAM3 | YDR034W-B | YOL060C | YDR034W-B | Protein required for normal mitochondrial morphology; has similarity to hemolysins. | Cysteine-rich and transmembrane domain-containing protein YDR034W-B; Predicted tail-anchored plasma membrane protein; contains conserved CYSTM module; related proteins in other organisms may be involved in response to stress; N- and C-terminal fusion proteins localize to the cell periphery; YDR034W-B has a paralog, YBR056W-A, that arose from the whole genome duplication; Belongs to the CYSTM1 family. | 0.558 |
| MAM3 | YJL133C-A | YOL060C | YJL133C-A | Protein required for normal mitochondrial morphology; has similarity to hemolysins. | Uncharacterized protein YJL133C-A; Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies. | 0.538 |
| MAM3 | YJL136W-A | YOL060C | YJL136W-A | Protein required for normal mitochondrial morphology; has similarity to hemolysins. | Uncharacterized protein YJL136W-A; Putative protein of unknown function; identified by SAGE. | 0.543 |
| MAM3 | YLR126C | YOL060C | YLR126C | Protein required for normal mitochondrial morphology; has similarity to hemolysins. | Putative glutamine amidotransferase; has Aft1p-binding motif in the promoter; may be involved in copper and iron homeostasis; YLR126C is not an essential protein; relocalizes from nucleus to cytoplasmic foci upon DNA replication stress. | 0.835 |
| MAM3 | YMR182W-A | YOL060C | YMR182W-A | Protein required for normal mitochondrial morphology; has similarity to hemolysins. | Uncharacterized protein YMR182W-A; Putative protein of unknown function. | 0.510 |
| MRX4 | YHR069C-A | YPL168W | YHR069C-A | MIOREX complex component 4; Protein that associates with mitochondrial ribosome; green fluorescent protein (GFP)-fusion protein localizes to the mitochondrion; expression may be cell cycle-regulated. | Putative uncharacterized membrane protein YHR069C-A; Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps ORF TRM5/YHR070W. | 0.414 |
| MRX4 | YIL134C-A | YPL168W | YIL134C-A | MIOREX complex component 4; Protein that associates with mitochondrial ribosome; green fluorescent protein (GFP)-fusion protein localizes to the mitochondrion; expression may be cell cycle-regulated. | Uncharacterized protein YIL134C-A; Putative protein of unknown function; identified by fungal homology and RT-PCR. | 0.414 |
| MRX4 | YJL197C-A | YPL168W | YJL197C-A | MIOREX complex component 4; Protein that associates with mitochondrial ribosome; green fluorescent protein (GFP)-fusion protein localizes to the mitochondrion; expression may be cell cycle-regulated. | Uncharacterized protein YJL197C-A; Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene YJL197C/UBP12. | 0.414 |
| MRX4 | YJR038C | YPL168W | YJR038C | MIOREX complex component 4; Protein that associates with mitochondrial ribosome; green fluorescent protein (GFP)-fusion protein localizes to the mitochondrion; expression may be cell cycle-regulated. | Putative uncharacterized protein YJR038C; Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data. | 0.414 |
| MRX4 | YOR073W-A | YPL168W | YOR073W-A | MIOREX complex component 4; Protein that associates with mitochondrial ribosome; green fluorescent protein (GFP)-fusion protein localizes to the mitochondrion; expression may be cell cycle-regulated. | Putative uncharacterized protein YOR073W-A; Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially/completely overlaps the verified ORF CDC21/YOR074C; identified by RT-PCR. | 0.414 |
| SCM4 | YDR034W-B | YGR049W | YDR034W-B | Protein SCM4; Mitochondrial outer membrane protein of unknown function; predicted to have 4 transmembrane segments; import is mediated by Tom70p and Mim1p; interacts genetically with a cdc4 mutation; SCM4 has a paralog, ATG33, that arose from the whole genome duplication. | Cysteine-rich and transmembrane domain-containing protein YDR034W-B; Predicted tail-anchored plasma membrane protein; contains conserved CYSTM module; related proteins in other organisms may be involved in response to stress; N- and C-terminal fusion proteins localize to the cell periphery; YDR034W-B has a paralog, YBR056W-A, that arose from the whole genome duplication; Belongs to the CYSTM1 family. | 0.474 |
| SCM4 | YJL133C-A | YGR049W | YJL133C-A | Protein SCM4; Mitochondrial outer membrane protein of unknown function; predicted to have 4 transmembrane segments; import is mediated by Tom70p and Mim1p; interacts genetically with a cdc4 mutation; SCM4 has a paralog, ATG33, that arose from the whole genome duplication. | Uncharacterized protein YJL133C-A; Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies. | 0.444 |
| SCM4 | YJL136W-A | YGR049W | YJL136W-A | Protein SCM4; Mitochondrial outer membrane protein of unknown function; predicted to have 4 transmembrane segments; import is mediated by Tom70p and Mim1p; interacts genetically with a cdc4 mutation; SCM4 has a paralog, ATG33, that arose from the whole genome duplication. | Uncharacterized protein YJL136W-A; Putative protein of unknown function; identified by SAGE. | 0.450 |
| YDR034W-B | MAM3 | YDR034W-B | YOL060C | Cysteine-rich and transmembrane domain-containing protein YDR034W-B; Predicted tail-anchored plasma membrane protein; contains conserved CYSTM module; related proteins in other organisms may be involved in response to stress; N- and C-terminal fusion proteins localize to the cell periphery; YDR034W-B has a paralog, YBR056W-A, that arose from the whole genome duplication; Belongs to the CYSTM1 family. | Protein required for normal mitochondrial morphology; has similarity to hemolysins. | 0.558 |
| YDR034W-B | SCM4 | YDR034W-B | YGR049W | Cysteine-rich and transmembrane domain-containing protein YDR034W-B; Predicted tail-anchored plasma membrane protein; contains conserved CYSTM module; related proteins in other organisms may be involved in response to stress; N- and C-terminal fusion proteins localize to the cell periphery; YDR034W-B has a paralog, YBR056W-A, that arose from the whole genome duplication; Belongs to the CYSTM1 family. | Protein SCM4; Mitochondrial outer membrane protein of unknown function; predicted to have 4 transmembrane segments; import is mediated by Tom70p and Mim1p; interacts genetically with a cdc4 mutation; SCM4 has a paralog, ATG33, that arose from the whole genome duplication. | 0.474 |
| YDR034W-B | YIL134C-A | YDR034W-B | YIL134C-A | Cysteine-rich and transmembrane domain-containing protein YDR034W-B; Predicted tail-anchored plasma membrane protein; contains conserved CYSTM module; related proteins in other organisms may be involved in response to stress; N- and C-terminal fusion proteins localize to the cell periphery; YDR034W-B has a paralog, YBR056W-A, that arose from the whole genome duplication; Belongs to the CYSTM1 family. | Uncharacterized protein YIL134C-A; Putative protein of unknown function; identified by fungal homology and RT-PCR. | 0.410 |
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