Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACT1 | BDF1 | YFL039C | YLR399C | Actin; structural protein involved in cell polarization, endocytosis, and other cytoskeletal functions. | Bromodomain-containing factor 1; Protein involved in transcription initiation; functions at TATA-containing promoters; associates with the basal transcription factor TFIID; contains two bromodomains; corresponds to the C-terminal region of mammalian TAF1; redundant with Bdf2p; BDF1 has a paralog, BDF2, that arose from the whole genome duplication. | 0.987 |
| ACT1 | EAF3 | YFL039C | YPR023C | Actin; structural protein involved in cell polarization, endocytosis, and other cytoskeletal functions. | Chromatin modification-related protein EAF3; Component of the Rpd3S histone deacetylase complex; Esa1p-associated factor, nonessential component of the NuA4 acetyltransferase complex, homologous to Drosophila dosage compensation protein MSL3; plays a role in regulating Ty1 transposition. | 0.970 |
| ACT1 | HHF1 | YFL039C | YBR009C | Actin; structural protein involved in cell polarization, endocytosis, and other cytoskeletal functions. | Histone H4; core histone protein required for chromatin assembly and chromosome function; one of two identical histone proteins (see also HHF2); contributes to telomeric silencing; N-terminal domain involved in maintaining genomic integrity. | 0.970 |
| ACT1 | HHF2 | YFL039C | YNL030W | Actin; structural protein involved in cell polarization, endocytosis, and other cytoskeletal functions. | Histone H4; core histone protein required for chromatin assembly and chromosome function; one of two identical histone proteins (see also HHF1); contributes to telomeric silencing; N-terminal domain involved in maintaining genomic integrity. | 0.951 |
| ACT1 | IES2 | YFL039C | YNL215W | Actin; structural protein involved in cell polarization, endocytosis, and other cytoskeletal functions. | Ino eighty subunit 2; Protein that associates with the INO80 chromatin remodeling complex; associates with the INO80 complex under low-salt conditions; essential for growth under anaerobic conditions; protein abundance increases in response to DNA replication stress; Belongs to the IES2 family. | 0.948 |
| ACT1 | IES6 | YFL039C | YEL044W | Actin; structural protein involved in cell polarization, endocytosis, and other cytoskeletal functions. | Chromatin-remodeling complex subunit IES6; Component of the INO80 chromatin remodeling complex; critical for INO80 function; involved in regulation of chromosome segregation and maintenance of normal centromeric chromatin structure; human ortholog INO80C is a member of the human INO80 complex; implicated in DNA repair based on genetic interactions with RAD52 epistasis genes; Belongs to the IES6 family. | 0.972 |
| ACT1 | NHP10 | YFL039C | YDL002C | Actin; structural protein involved in cell polarization, endocytosis, and other cytoskeletal functions. | Non-histone protein 10; Non-essential INO80 chromatin remodeling complex subunit; preferentially binds DNA ends, protecting them from exonucleatic cleavage; deletion affects telomere maintenance via recombination; related to mammalian high mobility group proteins. | 0.991 |
| ACT1 | RPS1A | YFL039C | YLR441C | Actin; structural protein involved in cell polarization, endocytosis, and other cytoskeletal functions. | Ribosomal protein 10 (rp10) of the small (40S) subunit; homologous to mammalian ribosomal protein S3A, no bacterial homolog; RPS1A has a paralog, RPS1B, that arose from the whole genome duplication. | 0.541 |
| ACT1 | RPS1B | YFL039C | YML063W | Actin; structural protein involved in cell polarization, endocytosis, and other cytoskeletal functions. | Ribosomal protein 10 (rp10) of the small (40S) subunit; homologous to mammalian ribosomal protein S3A, no bacterial homolog; RPS1B has a paralog, RPS1A, that arose from the whole genome duplication. | 0.456 |
| ACT1 | SAS5 | YFL039C | YOR213C | Actin; structural protein involved in cell polarization, endocytosis, and other cytoskeletal functions. | Something about silencing protein 5; Subunit of the SAS complex (Sas2p, Sas4p, Sas5p); acetylates free histones and nucleosomes and regulates transcriptional silencing; stimulates Sas2p HAT activity. | 0.917 |
| ACT1 | SNF2 | YFL039C | YOR290C | Actin; structural protein involved in cell polarization, endocytosis, and other cytoskeletal functions. | Transcription regulatory protein SNF2; Catalytic subunit of the SWI/SNF chromatin remodeling complex; involved in transcriptional regulation; contains DNA-stimulated ATPase activity; functions interdependently in transcriptional activation with Snf5p and Snf6p. | 0.917 |
| ACT1 | SWC4 | YFL039C | YGR002C | Actin; structural protein involved in cell polarization, endocytosis, and other cytoskeletal functions. | SWR1-complex protein 4; Component of the Swr1p complex that incorporates Htz1p into chromatin; component of the NuA4 histone acetyltransferase complex. | 0.999 |
| ACT1 | SWR1 | YFL039C | YDR334W | Actin; structural protein involved in cell polarization, endocytosis, and other cytoskeletal functions. | Helicase SWR1; Swi2/Snf2-related ATPase; structural component of the SWR1 complex, which exchanges histone variant H2AZ (Htz1p) for chromatin-bound histone H2A; relocalizes to the cytosol in response to hypoxia; chronological aging factor that mediates lifespan extension by dietary restriction; Belongs to the SNF2/RAD54 helicase family. SWR1 subfamily. | 0.999 |
| ACT1 | TAF14 | YFL039C | YPL129W | Actin; structural protein involved in cell polarization, endocytosis, and other cytoskeletal functions. | Transcription initiation factor TFIID subunit 14; Subunit of TFIID, TFIIF, INO80, SWI/SNF, and NuA3 complexes; involved in RNA polymerase II transcription initiation and in chromatin modification; contains a YEATS domain; Belongs to the TAF14 family. | 0.994 |
| ACT1 | VPS71 | YFL039C | YML041C | Actin; structural protein involved in cell polarization, endocytosis, and other cytoskeletal functions. | Vacuolar protein sorting-associated protein 71; Nucleosome-binding component of the SWR1 complex; SWR1 exchanges histone variant H2AZ (Htz1p) for chromatin-bound histone H2A; required for vacuolar protein sorting. | 0.990 |
| ACT1 | VPS72 | YFL039C | YDR485C | Actin; structural protein involved in cell polarization, endocytosis, and other cytoskeletal functions. | Vacuolar protein sorting-associated protein 72; Htz1p-binding component of the SWR1 complex; exchanges histone variant H2AZ (Htz1p) for chromatin-bound histone H2A; may function as a lock that prevents removal of H2AZ from nucleosomes; required for vacuolar protein sorting. | 0.993 |
| ACT1 | YAF9 | YFL039C | YNL107W | Actin; structural protein involved in cell polarization, endocytosis, and other cytoskeletal functions. | Protein AF-9 homolog; Subunit of NuA4 histone H4 acetyltransferase and SWR1 complexes; may function to antagonize silencing near telomeres; interacts directly with Swc4p; has homology to human leukemogenic protein AF9; contains a YEATS domain. | 0.995 |
| BDF1 | ACT1 | YLR399C | YFL039C | Bromodomain-containing factor 1; Protein involved in transcription initiation; functions at TATA-containing promoters; associates with the basal transcription factor TFIID; contains two bromodomains; corresponds to the C-terminal region of mammalian TAF1; redundant with Bdf2p; BDF1 has a paralog, BDF2, that arose from the whole genome duplication. | Actin; structural protein involved in cell polarization, endocytosis, and other cytoskeletal functions. | 0.987 |
| BDF1 | EAF3 | YLR399C | YPR023C | Bromodomain-containing factor 1; Protein involved in transcription initiation; functions at TATA-containing promoters; associates with the basal transcription factor TFIID; contains two bromodomains; corresponds to the C-terminal region of mammalian TAF1; redundant with Bdf2p; BDF1 has a paralog, BDF2, that arose from the whole genome duplication. | Chromatin modification-related protein EAF3; Component of the Rpd3S histone deacetylase complex; Esa1p-associated factor, nonessential component of the NuA4 acetyltransferase complex, homologous to Drosophila dosage compensation protein MSL3; plays a role in regulating Ty1 transposition. | 0.444 |
| BDF1 | HHF1 | YLR399C | YBR009C | Bromodomain-containing factor 1; Protein involved in transcription initiation; functions at TATA-containing promoters; associates with the basal transcription factor TFIID; contains two bromodomains; corresponds to the C-terminal region of mammalian TAF1; redundant with Bdf2p; BDF1 has a paralog, BDF2, that arose from the whole genome duplication. | Histone H4; core histone protein required for chromatin assembly and chromosome function; one of two identical histone proteins (see also HHF2); contributes to telomeric silencing; N-terminal domain involved in maintaining genomic integrity. | 0.989 |
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