13 items (Coffea canephora) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A068TMZ3	Uncharacterized protein. (261 aa)
	A0A068TQ92	Uncharacterized protein. (837 aa)
	A0A068TTX2	Uncharacterized protein. (652 aa)
	A0A068TYJ6	Uncharacterized protein. (262 aa)
	A0A068TYR8	Methyltransferase. (696 aa)
	A0A068TZW8	PMR5N domain-containing protein. (322 aa)
	A0A068U340	Uncharacterized protein. (544 aa)
	A0A068U5B5	Uncharacterized protein. (180 aa)
	A0A068U8M9	Uncharacterized protein. (541 aa)
	A0A068U9V0	F-box domain-containing protein. (303 aa)
	A0A068UKB1	PORR domain-containing protein. (525 aa)
	A0A068UPU0	Uncharacterized protein. (438 aa)
	A0A068UXG5	Uncharacterized protein. (422 aa)

Your Current Organism:

Coffea canephora

NCBI taxonomy Id: 49390
Other names: C. canephora, Coffea canephora Pierre ex A.Froehner, Coffea canephora var. robusta, Coffea canephora var. robusta (L.Linden) A.Chev., Coffea robusta, Coffea robusta L.Linden, robusta coffee

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A068TMZ3	A0A068TYR8	Uncharacterized protein.	Methyltransferase.	0.554
A0A068TMZ3	A0A068U340	Uncharacterized protein.	Uncharacterized protein.	0.401
A0A068TMZ3	A0A068U9V0	Uncharacterized protein.	F-box domain-containing protein.	0.443
A0A068TMZ3	A0A068UKB1	Uncharacterized protein.	PORR domain-containing protein.	0.446
A0A068TQ92	A0A068TTX2	Uncharacterized protein.	Uncharacterized protein.	0.491
A0A068TQ92	A0A068TYJ6	Uncharacterized protein.	Uncharacterized protein.	0.402
A0A068TQ92	A0A068TYR8	Uncharacterized protein.	Methyltransferase.	0.427
A0A068TQ92	A0A068TZW8	Uncharacterized protein.	PMR5N domain-containing protein.	0.427
A0A068TQ92	A0A068U340	Uncharacterized protein.	Uncharacterized protein.	0.450
A0A068TQ92	A0A068UKB1	Uncharacterized protein.	PORR domain-containing protein.	0.490
A0A068TQ92	A0A068UPU0	Uncharacterized protein.	Uncharacterized protein.	0.487
A0A068TTX2	A0A068TQ92	Uncharacterized protein.	Uncharacterized protein.	0.491
A0A068TTX2	A0A068TYJ6	Uncharacterized protein.	Uncharacterized protein.	0.436
A0A068TTX2	A0A068U340	Uncharacterized protein.	Uncharacterized protein.	0.423
A0A068TTX2	A0A068UKB1	Uncharacterized protein.	PORR domain-containing protein.	0.409
A0A068TYJ6	A0A068TQ92	Uncharacterized protein.	Uncharacterized protein.	0.402
A0A068TYJ6	A0A068TTX2	Uncharacterized protein.	Uncharacterized protein.	0.436
A0A068TYJ6	A0A068TYR8	Uncharacterized protein.	Methyltransferase.	0.557
A0A068TYJ6	A0A068U340	Uncharacterized protein.	Uncharacterized protein.	0.414
A0A068TYJ6	A0A068U9V0	Uncharacterized protein.	F-box domain-containing protein.	0.427

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