(112 nodes) Mixed, incl. Chromatin remodeling, and Histone deacetylation network (Coffea canephora)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A068TLA1	Uncharacterized protein. (906 aa)
	A0A068TLS8	UBP-type domain-containing protein. (163 aa)
	A0A068TM03	Uncharacterized protein. (275 aa)
	A0A068TM20	Uncharacterized protein. (881 aa)
	A0A068TND3	Helicase ATP-binding domain-containing protein. (132 aa)
	A0A068TP90	Uncharacterized protein. (928 aa)
	A0A068TQC4	RanBP2-type domain-containing protein. (607 aa)
	A0A068TQK6	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (389 aa)
	A0A068TR78	Uncharacterized protein. (225 aa)
	A0A068TRX2	Histone H2A; Belongs to the histone H2A family. (131 aa)
	A0A068TRZ3	Uncharacterized protein. (705 aa)
	A0A068TSF7	HIRAN domain-containing protein. (541 aa)
	A0A068TT10	PHD finger protein ING. (249 aa)
	A0A068TT69	Uncharacterized protein; Belongs to the actin family. (636 aa)
	A0A068TT92	Uncharacterized protein. (158 aa)
	A0A068TTE9	Uncharacterized protein. (529 aa)
	A0A068TU99	Uncharacterized protein. (1344 aa)
	A0A068TUN1	YL1_C domain-containing protein. (359 aa)
	A0A068TV00	Uncharacterized protein; Belongs to the actin family. (720 aa)
	A0A068TVI3	HDAC_interact domain-containing protein. (1426 aa)
	A0A068TWZ2	Enhancer of polycomb-like protein. (786 aa)
	A0A068TX91	Uncharacterized protein. (174 aa)
	A0A068TZB6	MRG domain-containing protein. (258 aa)
	A0A068TZJ8	Uncharacterized protein. (632 aa)
	A0A068U0Y5	Uncharacterized protein. (126 aa)
	A0A068U133	HIT-type domain-containing protein. (175 aa)
	A0A068U255	RuvB-like helicase; Belongs to the RuvB family. (467 aa)
	A0A068U2J8	MRG domain-containing protein. (339 aa)
	A0A068U2R5	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (3863 aa)
	A0A068U3D8	C2H2-type domain-containing protein. (502 aa)
	A0A068U3L3	HDAC_interact domain-containing protein. (1370 aa)
	A0A068U6N1	FAR1 domain-containing protein. (252 aa)
	A0A068U6W9	Uncharacterized protein. (1483 aa)
	A0A068U6Y6	Myb-like domain-containing protein. (1115 aa)
	A0A068U715	FAR1 domain-containing protein. (243 aa)
	A0A068U7L9	Uncharacterized protein. (402 aa)
	A0A068U7V6	RuvB-like helicase. (168 aa)
	A0A068U7X2	Hist_deacetyl domain-containing protein. (439 aa)
	A0A068U8N3	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (500 aa)
	A0A068U9I8	Uncharacterized protein. (790 aa)
	A0A068UB40	Uncharacterized protein. (345 aa)
	A0A068UBA3	Bromo domain-containing protein. (923 aa)
	A0A068UBU8	Uncharacterized protein. (118 aa)
	A0A068UCN0	Uncharacterized protein. (905 aa)
	A0A068UCT6	Bromo domain-containing protein. (210 aa)
	A0A068UDX2	C2H2-type domain-containing protein. (554 aa)
	A0A068UE97	Helicase ATP-binding domain-containing protein. (367 aa)
	A0A068UEF1	Hist_deacetyl domain-containing protein. (345 aa)
	A0A068UEH1	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (430 aa)
	A0A068UEK5	Uncharacterized protein. (342 aa)
	A0A068UEU7	Uncharacterized protein. (480 aa)
	A0A068UF65	C2H2-type domain-containing protein. (459 aa)
	A0A068UF99	MBD domain-containing protein. (254 aa)
	A0A068UFC3	Uncharacterized protein. (1033 aa)
	A0A068UFD1	Uncharacterized protein. (326 aa)
	A0A068UFG5	Cir_N domain-containing protein. (535 aa)
	A0A068UFP3	RuvB-like helicase. (104 aa)
	A0A068UFS0	RuvB-like helicase; Belongs to the RuvB family. (464 aa)
	A0A068UFU0	Uncharacterized protein. (321 aa)
	A0A068UH71	Uncharacterized protein. (758 aa)
	A0A068UIB8	SWIM-type domain-containing protein. (181 aa)
	A0A068UJ10	Hist_deacetyl domain-containing protein. (361 aa)
	A0A068UKD9	Uncharacterized protein. (260 aa)
	A0A068UKX8	Uncharacterized protein. (1391 aa)
	A0A068UMF9	Uncharacterized protein. (2223 aa)
	A0A068UNB4	Uncharacterized protein. (819 aa)
	A0A068UNM5	Uncharacterized protein. (2049 aa)
	A0A068UPI5	Uncharacterized protein. (144 aa)
	A0A068URG2	Uncharacterized protein. (517 aa)
	A0A068USJ5	Uncharacterized protein. (2206 aa)
	A0A068UTS4	BCNT-C domain-containing protein. (263 aa)
	A0A068UV99	RuvB-like helicase. (88 aa)
	A0A068UVS6	Hydrolase_4 domain-containing protein. (377 aa)
	A0A068UWY6	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (457 aa)
	A0A068UXW6	Uncharacterized protein. (1095 aa)
	A0A068UY05	Uncharacterized protein. (351 aa)
	A0A068UYV4	Uncharacterized protein. (713 aa)
	A0A068UZ09	Uncharacterized protein. (317 aa)
	A0A068UZW1	YL1_C domain-containing protein. (124 aa)
	A0A068V079	Uncharacterized protein. (1277 aa)
	A0A068V0J7	Uncharacterized protein. (1530 aa)
	A0A068V0K4	Uncharacterized protein. (359 aa)
	A0A068V1U1	Uncharacterized protein. (407 aa)
	A0A068V3K6	Uncharacterized protein. (1136 aa)
	A0A068V430	Uncharacterized protein. (365 aa)
	A0A068V4L5	Helicase C-terminal domain-containing protein. (461 aa)
	A0A068V4T8	Uncharacterized protein. (702 aa)
	A0A068V8C6	SANT domain-containing protein. (462 aa)
	A0A068V8I7	RuvB-like helicase. (86 aa)
	A0A068V8Z3	HMG box domain-containing protein. (212 aa)
	A0A068VAL6	Enhancer of polycomb-like protein. (452 aa)
	A0A068VBR5	TPR_REGION domain-containing protein. (466 aa)
	A0A068VC05	PAPA-1 domain-containing protein. (544 aa)
	A0A068VCU4	Helicase C-terminal domain-containing protein. (161 aa)
	A0A068VD13	Uncharacterized protein. (1333 aa)
	A0A068VDI0	Uncharacterized protein. (1493 aa)
	A0A068VDS8	Uncharacterized protein. (276 aa)
	A0A068VEU6	RuvB-like helicase. (144 aa)
	A0A068VFT4	PHD finger protein ING. (259 aa)
	A0A068VGG2	Uncharacterized protein. (1179 aa)
	A0A068VGY5	Uncharacterized protein. (121 aa)
	A0A068VH66	Helicase C-terminal domain-containing protein. (611 aa)
	A0A068VIA6	Uncharacterized protein. (734 aa)
	A0A068VJ38	Uncharacterized protein. (162 aa)
	A0A068VKI0	Uncharacterized protein. (269 aa)
	A0A068VKK2	HMG box domain-containing protein. (140 aa)
	A0A068VKT9	Uncharacterized protein. (344 aa)
	A0A068VN29	Helicase ATP-binding domain-containing protein. (208 aa)
	A0A068VN61	Bromo domain-containing protein. (641 aa)
	A0A068VPX8	BCNT-C domain-containing protein. (259 aa)
	A0A068VQI4	Helicase ATP-binding domain-containing protein. (254 aa)
	A0A068VQL7	Uncharacterized protein. (51 aa)

Your Current Organism:

Coffea canephora

NCBI taxonomy Id: 49390
Other names: C. canephora, Coffea canephora Pierre ex A.Froehner, Coffea canephora var. robusta, Coffea canephora var. robusta (L.Linden) A.Chev., Coffea robusta, Coffea robusta L.Linden, robusta coffee

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A068TLA1	A0A068TND3	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.557
A0A068TLA1	A0A068TP90	Uncharacterized protein.	Uncharacterized protein.	0.659
A0A068TLA1	A0A068TQK6	Uncharacterized protein.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.486
A0A068TLA1	A0A068TRZ3	Uncharacterized protein.	Uncharacterized protein.	0.513
A0A068TLA1	A0A068TTE9	Uncharacterized protein.	Uncharacterized protein.	0.512
A0A068TLA1	A0A068TU99	Uncharacterized protein.	Uncharacterized protein.	0.519
A0A068TLA1	A0A068TUN1	Uncharacterized protein.	YL1_C domain-containing protein.	0.423
A0A068TLA1	A0A068TV00	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.756
A0A068TLA1	A0A068TX91	Uncharacterized protein.	Uncharacterized protein.	0.924
A0A068TLA1	A0A068U255	Uncharacterized protein.	RuvB-like helicase; Belongs to the RuvB family.	0.455
A0A068TLA1	A0A068U2R5	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.440
A0A068TLA1	A0A068U715	Uncharacterized protein.	FAR1 domain-containing protein.	0.474
A0A068TLA1	A0A068U7L9	Uncharacterized protein.	Uncharacterized protein.	0.924
A0A068TLA1	A0A068U7V6	Uncharacterized protein.	RuvB-like helicase.	0.455
A0A068TLA1	A0A068U9I8	Uncharacterized protein.	Uncharacterized protein.	0.519
A0A068TLA1	A0A068UCN0	Uncharacterized protein.	Uncharacterized protein.	0.513
A0A068TLA1	A0A068UE97	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.688
A0A068TLA1	A0A068UEU7	Uncharacterized protein.	Uncharacterized protein.	0.473
A0A068TLA1	A0A068UFC3	Uncharacterized protein.	Uncharacterized protein.	0.517
A0A068TLA1	A0A068UFP3	Uncharacterized protein.	RuvB-like helicase.	0.446

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