(19 nodes) Bromo adjacent homology (BAH) domain superfamily network (Coffea canephora)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A068UA09	Uncharacterized protein. (215 aa)
	A0A068TM04	Uncharacterized protein. (216 aa)
	A0A068TNS3	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1496 aa)
	A0A068TWH5	BAH domain-containing protein. (655 aa)
	A0A068U7F1	Uncharacterized protein. (209 aa)
	A0A068U864	BAH domain-containing protein. (653 aa)
	A0A068UM41	BAH domain-containing protein. (271 aa)
	A0A068UN83	Uncharacterized protein. (161 aa)
	A0A068UPH6	BAH domain-containing protein. (185 aa)
	A0A068UT11	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1498 aa)
	A0A068UTM8	Uncharacterized protein. (792 aa)
	A0A068UUN1	Uncharacterized protein. (213 aa)
	A0A068UYZ2	BAH domain-containing protein. (642 aa)
	A0A068UZE7	Uncharacterized protein. (799 aa)
	A0A068UZW0	Uncharacterized protein. (887 aa)
	A0A068V920	Uncharacterized protein. (1608 aa)
	A0A068VBG8	Uncharacterized protein. (606 aa)
	A0A068VEA6	Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (825 aa)
	A0A068VFK8	BAH domain-containing protein. (940 aa)

Your Current Organism:

Coffea canephora

NCBI taxonomy Id: 49390
Other names: C. canephora, Coffea canephora Pierre ex A.Froehner, Coffea canephora var. robusta, Coffea canephora var. robusta (L.Linden) A.Chev., Coffea robusta, Coffea robusta L.Linden, robusta coffee

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A068TNS3	A0A068UTM8	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	Uncharacterized protein.	0.886
A0A068TNS3	A0A068UZW0	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	Uncharacterized protein.	0.919
A0A068UT11	A0A068UTM8	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	Uncharacterized protein.	0.883
A0A068UT11	A0A068UZW0	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	Uncharacterized protein.	0.917
A0A068UTM8	A0A068TNS3	Uncharacterized protein.	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	0.886
A0A068UTM8	A0A068UT11	Uncharacterized protein.	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	0.883
A0A068UTM8	A0A068UZW0	Uncharacterized protein.	Uncharacterized protein.	0.892
A0A068UZW0	A0A068TNS3	Uncharacterized protein.	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	0.919
A0A068UZW0	A0A068UT11	Uncharacterized protein.	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	0.917
A0A068UZW0	A0A068UTM8	Uncharacterized protein.	Uncharacterized protein.	0.892

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