(15 nodes) Mixed, incl. Protein of unknown function DUF4666, and Uncharacterized protein At5g23160-like network (Nicotiana attenuata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NDR1_0	Protein ndr1. (201 aa)
	A4A49_14897	Uncharacterized protein. (110 aa)
	A4A49_53299	Uncharacterized protein. (119 aa)
	A4A49_55087	Putative ribonuclease h protein. (236 aa)
	A4A49_24095	RING-CH-type domain-containing protein. (361 aa)
	A4A49_18747	Uncharacterized protein. (120 aa)
	A4A49_52185	Putative ribonuclease h protein. (221 aa)
	A4A49_32266	Uncharacterized protein. (130 aa)
	A4A49_41286	VQ domain-containing protein. (287 aa)
	A4A49_52234	Putative ribonuclease h protein. (212 aa)
	A4A49_63639	RNase H domain-containing protein. (214 aa)
	A4A49_20424	Uncharacterized protein. (301 aa)
	A4A49_58875	Putative ribonuclease h protein. (212 aa)
	A4A49_11601	Uncharacterized protein. (294 aa)
	A4A49_06103	Uncharacterized protein. (99 aa)

Your Current Organism:

Nicotiana attenuata

NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A4A49_06103	A4A49_11601	A0A314L8N5	A0A314L829	Uncharacterized protein.	Uncharacterized protein.	0.415
A4A49_06103	A4A49_14897	A0A314L8N5	A0A1J6I967	Uncharacterized protein.	Uncharacterized protein.	0.519
A4A49_06103	A4A49_18747	A0A314L8N5	A0A1J6IMZ5	Uncharacterized protein.	Uncharacterized protein.	0.520
A4A49_06103	A4A49_24095	A0A314L8N5	A0A1J6IJQ2	Uncharacterized protein.	RING-CH-type domain-containing protein.	0.436
A4A49_06103	A4A49_32266	A0A314L8N5	A0A1J6JZ70	Uncharacterized protein.	Uncharacterized protein.	0.482
A4A49_06103	A4A49_52185	A0A314L8N5	A0A1J6IW71	Uncharacterized protein.	Putative ribonuclease h protein.	0.462
A4A49_06103	A4A49_52234	A0A314L8N5	A0A1J6KGC3	Uncharacterized protein.	Putative ribonuclease h protein.	0.472
A4A49_06103	A4A49_53299	A0A314L8N5	A0A1J6IDW1	Uncharacterized protein.	Uncharacterized protein.	0.497
A4A49_06103	A4A49_55087	A0A314L8N5	A0A1J6IJ52	Uncharacterized protein.	Putative ribonuclease h protein.	0.509
A4A49_06103	A4A49_58875	A0A314L8N5	A0A314L4A1	Uncharacterized protein.	Putative ribonuclease h protein.	0.470
A4A49_06103	A4A49_63639	A0A314L8N5	A0A314KH64	Uncharacterized protein.	RNase H domain-containing protein.	0.508
A4A49_06103	NDR1_0	A0A314L8N5	A0A1J6HYK3	Uncharacterized protein.	Protein ndr1.	0.497
A4A49_11601	A4A49_06103	A0A314L829	A0A314L8N5	Uncharacterized protein.	Uncharacterized protein.	0.415
A4A49_11601	A4A49_14897	A0A314L829	A0A1J6I967	Uncharacterized protein.	Uncharacterized protein.	0.449
A4A49_11601	A4A49_18747	A0A314L829	A0A1J6IMZ5	Uncharacterized protein.	Uncharacterized protein.	0.433
A4A49_11601	A4A49_32266	A0A314L829	A0A1J6JZ70	Uncharacterized protein.	Uncharacterized protein.	0.425
A4A49_11601	A4A49_41286	A0A314L829	A0A1J6K2T3	Uncharacterized protein.	VQ domain-containing protein.	0.426
A4A49_11601	A4A49_53299	A0A314L829	A0A1J6IDW1	Uncharacterized protein.	Uncharacterized protein.	0.439
A4A49_11601	NDR1_0	A0A314L829	A0A1J6HYK3	Uncharacterized protein.	Protein ndr1.	0.508
A4A49_14897	A4A49_06103	A0A1J6I967	A0A314L8N5	Uncharacterized protein.	Uncharacterized protein.	0.519