STRINGSTRING
CRY1_1 CRY1_1 COP1_0 COP1_0 COP1_2 COP1_2 CRY1_0 CRY1_0 SPA2 SPA2 COP1_4 COP1_4 SPA1 SPA1 RUP2 RUP2 HY5 HY5 CRY2_0 CRY2_0 UVR8_14 UVR8_14
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CRY1_1Cryptochrome-1. (581 aa)
COP1_0E3 ubiquitin-protein ligase cop1. (671 aa)
COP1_2E3 ubiquitin-protein ligase cop1. (563 aa)
CRY1_0Cryptochrome-1. (681 aa)
SPA2Protein spa1-related 2. (1042 aa)
COP1_4E3 ubiquitin-protein ligase cop1. (680 aa)
SPA1Protein suppressor of phya-105 1. (1005 aa)
RUP2Wd repeat-containing protein rup2. (386 aa)
HY5Transcription factor hy5. (158 aa)
CRY2_0Cryptochrome-2. (645 aa)
UVR8_14Ultraviolet-b receptor uvr8. (411 aa)
Your Current Organism:
Nicotiana attenuata
NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.