(23 nodes) Response to far red light network (Nicotiana attenuata)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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textmining

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protein homology

Your Input:
	MED25_1	Mediator of rna polymerase ii transcription subunit 25. (580 aa)
	XTH16_1	Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family. (290 aa)
	MED25_0	Mediator of rna polymerase ii transcription subunit 25. (828 aa)
	GRF7	Growth-regulating factor 7. (562 aa)
	PTAC12	Protein plastid transcriptionally active 12. (533 aa)
	ABCI21	Abc transporter i family member 21. (286 aa)
	SIGE	Rna polymerase sigma factor sige, chloroplasticmitochondrial. (518 aa)
	XTH15_3	Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family. (290 aa)
	A4A49_40258	ANK_REP_REGION domain-containing protein. (165 aa)
	A4A49_38308	ANK_REP_REGION domain-containing protein. (169 aa)
	CRY1_0	Cryptochrome-1. (681 aa)
	COL13	Zinc finger protein constans-like 13. (373 aa)
	A4A49_33036	Amidohydro_3 domain-containing protein. (587 aa)
	ELIP1_0	Early light-induced protein 1, chloroplastic. (194 aa)
	FHY3_1	Protein far-red elongated hypocotyl 3. (789 aa)
	HY5	Transcription factor hy5. (158 aa)
	PKS1_1	Protein phytochrome kinase substrate 1. (474 aa)
	UNE10_1	Transcription factor une10. (471 aa)
	CRY1_1	Cryptochrome-1. (581 aa)
	XTH16_0	Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family. (284 aa)
	A4A49_06557	Uncharacterized protein. (257 aa)
	ELIP1_1	Early light-induced protein 1, chloroplastic. (194 aa)
	A4A49_22220	Uncharacterized protein. (155 aa)

Your Current Organism:

Nicotiana attenuata

NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A4A49_06557	FHY3_1	A0A1J6I0I2	A0A314KJ18	Uncharacterized protein.	Protein far-red elongated hypocotyl 3.	0.493
A4A49_06557	HY5	A0A1J6I0I2	A0A314L2Z5	Uncharacterized protein.	Transcription factor hy5.	0.547
A4A49_38308	SIGE	A0A1J6JZ40	A0A1J6JHG3	ANK_REP_REGION domain-containing protein.	Rna polymerase sigma factor sige, chloroplasticmitochondrial.	0.435
A4A49_40258	SIGE	A0A1J6JXK0	A0A1J6JHG3	ANK_REP_REGION domain-containing protein.	Rna polymerase sigma factor sige, chloroplasticmitochondrial.	0.435
ABCI21	SIGE	A0A1J6JFC1	A0A1J6JHG3	Abc transporter i family member 21.	Rna polymerase sigma factor sige, chloroplasticmitochondrial.	0.418
CRY1_0	CRY1_1	A0A1J6KAV6	A0A1J6I8E9	Cryptochrome-1.	Cryptochrome-1.	0.900
CRY1_0	HY5	A0A1J6KAV6	A0A314L2Z5	Cryptochrome-1.	Transcription factor hy5.	0.495
CRY1_1	CRY1_0	A0A1J6I8E9	A0A1J6KAV6	Cryptochrome-1.	Cryptochrome-1.	0.900
CRY1_1	HY5	A0A1J6I8E9	A0A314L2Z5	Cryptochrome-1.	Transcription factor hy5.	0.495
FHY3_1	A4A49_06557	A0A314KJ18	A0A1J6I0I2	Protein far-red elongated hypocotyl 3.	Uncharacterized protein.	0.493
FHY3_1	HY5	A0A314KJ18	A0A314L2Z5	Protein far-red elongated hypocotyl 3.	Transcription factor hy5.	0.736
HY5	A4A49_06557	A0A314L2Z5	A0A1J6I0I2	Transcription factor hy5.	Uncharacterized protein.	0.547
HY5	CRY1_0	A0A314L2Z5	A0A1J6KAV6	Transcription factor hy5.	Cryptochrome-1.	0.495
HY5	CRY1_1	A0A314L2Z5	A0A1J6I8E9	Transcription factor hy5.	Cryptochrome-1.	0.495
HY5	FHY3_1	A0A314L2Z5	A0A314KJ18	Transcription factor hy5.	Protein far-red elongated hypocotyl 3.	0.736
SIGE	A4A49_38308	A0A1J6JHG3	A0A1J6JZ40	Rna polymerase sigma factor sige, chloroplasticmitochondrial.	ANK_REP_REGION domain-containing protein.	0.435
SIGE	A4A49_40258	A0A1J6JHG3	A0A1J6JXK0	Rna polymerase sigma factor sige, chloroplasticmitochondrial.	ANK_REP_REGION domain-containing protein.	0.435
SIGE	ABCI21	A0A1J6JHG3	A0A1J6JFC1	Rna polymerase sigma factor sige, chloroplasticmitochondrial.	Abc transporter i family member 21.	0.418