11 items (Nicotiana attenuata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JMJ14	Putative lysine-specific demethylase jmj14. (862 aa)
	HMGB9	High mobility group b protein 9. (366 aa)
	A4A49_29178	Uncharacterized protein. (398 aa)
	ARID5_0	At-rich interactive domain-containing protein 5. (548 aa)
	ARID2_0	At-rich interactive domain-containing protein 2. (649 aa)
	ARID2_1	At-rich interactive domain-containing protein 2. (735 aa)
	HMGB15	High mobility group b protein 15. (475 aa)
	HMGB10	High mobility group b protein 10. (320 aa)
	ARID5_1	At-rich interactive domain-containing protein 5. (617 aa)
	ARID1_0	At-rich interactive domain-containing protein 1. (699 aa)
	ARID4_1	At-rich interactive domain-containing protein 4. (765 aa)

Your Current Organism:

Nicotiana attenuata

NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A4A49_29178	HMGB10	A0A314L462	A0A1J6J3J4	Uncharacterized protein.	High mobility group b protein 10.	0.753
A4A49_29178	HMGB15	A0A314L462	A0A1J6J1U1	Uncharacterized protein.	High mobility group b protein 15.	0.753
A4A49_29178	HMGB9	A0A314L462	A0A1J6IUE6	Uncharacterized protein.	High mobility group b protein 9.	0.753
ARID5_0	HMGB10	A0A314L578	A0A1J6J3J4	At-rich interactive domain-containing protein 5.	High mobility group b protein 10.	0.419
ARID5_1	HMGB10	A0A314KIA5	A0A1J6J3J4	At-rich interactive domain-containing protein 5.	High mobility group b protein 10.	0.410
HMGB10	A4A49_29178	A0A1J6J3J4	A0A314L462	High mobility group b protein 10.	Uncharacterized protein.	0.753
HMGB10	ARID5_0	A0A1J6J3J4	A0A314L578	High mobility group b protein 10.	At-rich interactive domain-containing protein 5.	0.419
HMGB10	ARID5_1	A0A1J6J3J4	A0A314KIA5	High mobility group b protein 10.	At-rich interactive domain-containing protein 5.	0.410
HMGB10	HMGB15	A0A1J6J3J4	A0A1J6J1U1	High mobility group b protein 10.	High mobility group b protein 15.	0.833
HMGB10	HMGB9	A0A1J6J3J4	A0A1J6IUE6	High mobility group b protein 10.	High mobility group b protein 9.	0.834
HMGB15	A4A49_29178	A0A1J6J1U1	A0A314L462	High mobility group b protein 15.	Uncharacterized protein.	0.753
HMGB15	HMGB10	A0A1J6J1U1	A0A1J6J3J4	High mobility group b protein 15.	High mobility group b protein 10.	0.833
HMGB15	HMGB9	A0A1J6J1U1	A0A1J6IUE6	High mobility group b protein 15.	High mobility group b protein 9.	0.836
HMGB9	A4A49_29178	A0A1J6IUE6	A0A314L462	High mobility group b protein 9.	Uncharacterized protein.	0.753
HMGB9	HMGB10	A0A1J6IUE6	A0A1J6J3J4	High mobility group b protein 9.	High mobility group b protein 10.	0.834
HMGB9	HMGB15	A0A1J6IUE6	A0A1J6J1U1	High mobility group b protein 9.	High mobility group b protein 15.	0.836