STRINGSTRING
rmlA_1 rmlA_1 rfbC rfbC ino1 ino1 strL strL rmlA_2 rmlA_2 algC algC rmlC rmlC rfbB rfbB glmM_2 glmM_2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rmlA_1Glucose-1-phosphate thymidylyltransferase. (430 aa)
rfbCdTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (182 aa)
ino1Inositol-3-phosphate synthase. (368 aa)
strLdTDP-4-dehydrorhamnose reductase. (287 aa)
rmlA_2Glucose-1-phosphate thymidylyltransferase. (291 aa)
algCPhosphomannomutase/phosphoglucomutase; Belongs to the phosphohexose mutase family. (453 aa)
rmlCdTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (184 aa)
rfbBdTDP-glucose 4,6-dehydratase. (334 aa)
glmM_2Phosphoglucosamine mutase; Belongs to the phosphohexose mutase family. (454 aa)
Your Current Organism:
Methanobrevibacter curvatus
NCBI taxonomy Id: 49547
Other names: DSM 11111, M. curvatus, strain RFM-2
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