STRINGSTRING
EDY19587.1 EDY19587.1 EDY19943.1 EDY19943.1 EDY20413.1 EDY20413.1 EDY16661.1 EDY16661.1 EDY16660.1 EDY16660.1 EDY17222.1 EDY17222.1 EDY17474.1 EDY17474.1 EDY17655.1 EDY17655.1 EDY17854.1 EDY17854.1 EDY17836.1 EDY17836.1 ppk ppk EDY18069.1 EDY18069.1 atpB atpB EDY18063.1 EDY18063.1 atpF atpF atpH atpH atpA atpA atpG atpG atpD atpD atpC atpC EDY16662.1 EDY16662.1 EDY18606.1 EDY18606.1 EDY18605.1 EDY18605.1 EDY18602.1 EDY18602.1 nuoB nuoB nuoC nuoC EDY18484.1 EDY18484.1 EDY16179.1 EDY16179.1 EDY16353.1 EDY16353.1 EDY16371.1 EDY16371.1 EDY16572.1 EDY16572.1 EDY16663.1 EDY16663.1 EDY20345.1 EDY20345.1 EDY20344.1 EDY20344.1 ctaB ctaB EDY20312.1 EDY20312.1 EDY20311.1 EDY20311.1 EDY20307.1 EDY20307.1 EDY20306.1 EDY20306.1 EDY20302.1 EDY20302.1 EDY20301.1 EDY20301.1 EDY20300.1 EDY20300.1 rbfA rbfA EDY21794.1 EDY21794.1 EDY21793.1 EDY21793.1 EDY21689.1 EDY21689.1 EDY22463.1 EDY22463.1 EDY22413.1 EDY22413.1 EDY22412.1 EDY22412.1 EDY22411.1 EDY22411.1 EDY22410.1 EDY22410.1 EDY22409.1 EDY22409.1 nuoK nuoK EDY22406.1 EDY22406.1 nuoI nuoI nuoH nuoH EDY22403.1 EDY22403.1 EDY22402.1 EDY22402.1 nuoD nuoD EDY22303.1 EDY22303.1 EDY22223.1 EDY22223.1 EDY22097.1 EDY22097.1 EDY21958.1 EDY21958.1 EDY18711.1 EDY18711.1 EDY18710.1 EDY18710.1 EDY18965.1 EDY18965.1 EDY18816.1 EDY18816.1 EDY19261.1 EDY19261.1 EDY19093.1 EDY19093.1 EDY19077.1 EDY19077.1 EDY19075.1 EDY19075.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EDY19587.1Hypothetical protein; KEGG: dvl:Dvul_3054 eight transmembrane protein EpsH. (474 aa)
EDY19943.1PFAM: cytochrome c class I; KEGG: aba:Acid345_0435 hypothetical protein. (268 aa)
EDY20413.1PFAM: protein of unknown function UPF0132; KEGG: sus:Acid_6361 protein of unknown function UPF0132. (174 aa)
EDY16661.1Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (560 aa)
EDY16660.1Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). (317 aa)
EDY17222.1PFAM: protein of unknown function DUF344; KEGG: gme:Gmet_1092 protein of unknown function DUF344. (301 aa)
EDY17474.1TIGRFAM: eight transmembrane protein EpsH; PFAM: Eight transmembrane protein EpsH; KEGG: dar:Daro_2406 hypothetical protein. (502 aa)
EDY17655.1PFAM: peptidase M16 domain protein; KEGG: dsy:DSY2506 hypothetical protein. (423 aa)
EDY17854.1Inorganic diphosphatase; PFAM: CBS domain containing protein; DHHA2 domain protein; DRTGG domain protein; KEGG: rba:RB7084 putative manganese-dependent inorganic pyrophosphatase. (552 aa)
EDY17836.1NADH-ubiquinone/plastoquinone oxidoreductase chain 3; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. (149 aa)
ppkPolyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. (710 aa)
EDY18069.1NADH-dependant oxidoreductase-like protein; KEGG: rba:RB7773 similar to NADH-dependant oxidoreductase. (757 aa)
atpBATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. (305 aa)
EDY18063.1PFAM: H+transporting two-sector ATPase C subunit; KEGG: pdi:BDI_0267 putative ATP synthase C subunit. (72 aa)
atpFATP synthase F0, B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. (186 aa)
atpHH+transporting two-sector ATPase delta (OSCP) subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (133 aa)
atpAATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. (508 aa)
atpGATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. (288 aa)
atpDATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. (468 aa)
atpCATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. (137 aa)
EDY16662.1PFAM: cytochrome c oxidase subunit III; KEGG: noc:Noc_1246 cytochrome/quinol oxidase subunit 3. (214 aa)
EDY18606.1TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; KEGG: lic:LIC12001 succinate dehydrogenase cytochrome b subunit. (231 aa)
EDY18605.1KEGG: cau:Caur_1881 succinate dehydrogenase or fumarate reductase, flavoprotein subunit; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase. (662 aa)
EDY18602.1PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rrs:RoseRS_2398 succinate dehydrogenase/fumarate reductase iron-sulfur subunit. (249 aa)
nuoBNADH-quinone oxidoreductase, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (178 aa)
nuoCNADH (or F420H2) dehydrogenase, subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. (190 aa)
EDY18484.1PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: scl:sce3024 NADH dehydrogenase. (455 aa)
EDY16179.1Hypothetical protein; KEGG: rba:RB7773 similar to NADH-dependant oxidoreductase. (1154 aa)
EDY16353.1KEGG: rba:RB11948 probable secreted protein-putative xanthan lyase related. (682 aa)
EDY16371.1TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: rme:Rmet_5396 ATPase, E1-E2 type. (916 aa)
EDY16572.1PFAM: Rieske [2Fe-2S] domain protein; KEGG: sus:Acid_2926 Rieske (2Fe-2S) domain protein. (161 aa)
EDY16663.1TIGRFAM: caa(3)-type oxidase, subunit IV; KEGG: sus:Acid_0500 caa(3)-type oxidase, subunit IV. (89 aa)
EDY20345.1PFAM: peptidase M16 domain protein; KEGG: fjo:Fjoh_1544 peptidase M16 domain protein. (459 aa)
EDY20344.1PFAM: peptidase M16 domain protein; KEGG: gfo:GFO_3583 secreted peptidase, family M16. (471 aa)
ctaBProtoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. (304 aa)
EDY20312.1PFAM: cytochrome oxidase assembly; KEGG: sru:SRU_2368 putative cytochrome aa3 oxidase assembly protein, putative CtaA. (337 aa)
EDY20311.1PFAM: cytochrome c oxidase subunit II; KEGG: reu:Reut_B3632 cytochrome c oxidase, subunit II:cytochrome c, class I. (279 aa)
EDY20307.1Heme/copper-type cytochrome/quinol oxidase subunit 3-like protein; KEGG: gfo:GFO_0190 cytochrome o ubiquinol oxidase subunit III. (336 aa)
EDY20306.1PFAM: cytochrome c oxidase subunit I; KEGG: sus:Acid_5590 cytochrome-c oxidase. (623 aa)
EDY20302.1PFAM: cytochrome C oxidase mono-heme subunit/FixO; KEGG: net:Neut_1583 cytochrome c oxidase, mono-heme subunit/FixO. (227 aa)
EDY20301.1KEGG: eba:ebA2880 cytochrome c oxidase subunit transmembrane protein. (192 aa)
EDY20300.1KEGG: sru:SRU_0322 putative cytochrome-c oxidase. (321 aa)
rbfARibosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. (128 aa)
EDY21794.1KEGG: bth:BT_0434 hypothetical protein. (349 aa)
EDY21793.1KEGG: ava:Ava_0151 hypothetical protein. (355 aa)
EDY21689.1KEGG: sco:SCO0894 membrane protein. (146 aa)
EDY22463.1KEGG: mca:MCA1867 ferredoxin, 2Fe-2S, putative. (115 aa)
EDY22413.1PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: ssn:SSON_2333 NADH dehydrogenase subunit N. (242 aa)
EDY22412.1PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: drm:Dred_2036 proton-translocating NADH-quinone oxidoreductase, chain N. (275 aa)
EDY22411.1KEGG: cbe:Cbei_2987 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I). (489 aa)
EDY22410.1KEGG: dsy:DSY2580 NADH dehydrogenase I chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I). (488 aa)
EDY22409.1KEGG: fra:Francci3_0549 NADH dehydrogenase subunit L. (105 aa)
nuoKNADH-ubiquinone oxidoreductase chain 4L; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (106 aa)
EDY22406.1NADH-ubiquinone/plastoquinone oxidoreductase chain 6; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (170 aa)
nuoI4Fe-4S ferredoxin iron-sulfur binding domain protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (176 aa)
nuoHNADH dehydrogenase (quinone); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone. (385 aa)
EDY22403.1PFAM: ferredoxin; molybdopterin oxidoreductase; KEGG: sru:SRU_0400 NADH dehydrogenase I, G subunit. (559 aa)
EDY22402.1TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: sus:Acid_0113 NADH-quinone oxidoreductase, F subunit. (655 aa)
nuoDNADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. (420 aa)
EDY22303.1KEGG: cya:CYA_2462 putative iron-sulfur cluster-binding protein. (168 aa)
EDY22223.1PFAM: peptidase M16 domain protein; KEGG: mxa:MXAN_1141 peptidase, M16 (pitrilysin) family. (855 aa)
EDY22097.1KEGG: rrs:RoseRS_2240 hypothetical protein. (649 aa)
EDY21958.1TIGRFAM: eight transmembrane protein EpsH; PFAM: Eight transmembrane protein EpsH; KEGG: sus:Acid_0454 eight transmembrane protein EpsH. (346 aa)
EDY18711.1PFAM: peptidase M16 domain protein; KEGG: ccr:CC_3584 peptidase, M16 family. (507 aa)
EDY18710.1PFAM: peptidase M16 domain protein; KEGG: gvi:glr3686 probable peptidase. (463 aa)
EDY18965.1PFAM: protein of unknown function DUF344; KEGG: syn:slr1363 hypothetical protein. (252 aa)
EDY18816.1PFAM: permease; KEGG: ckl:CKL_2452 hypothetical protein. (327 aa)
EDY19261.1PFAM: FAD dependent oxidoreductase; KEGG: bcl:ABC3582 hypothetical protein. (473 aa)
EDY19093.1PFAM: Rieske [2Fe-2S] domain protein; KEGG: sus:Acid_2926 Rieske (2Fe-2S) domain protein. (170 aa)
EDY19077.1PFAM: cytochrome c class I; KEGG: mxa:MXAN_5539 cytochrome c oxidase, cbb3-type, subunit III. (196 aa)
EDY19075.1KEGG: mxa:MXAN_5541 cytochrome c oxidase, cbb3-type, subunit I/II; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome C oxidase mono-heme subunit/FixO; Belongs to the heme-copper respiratory oxidase family. (775 aa)
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.