(20 nodes) Binding-protein-dependent transport system inner membrane component network (Cellvibrio japonicus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

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gene fusions

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co-expression

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Your Input:
	CJA_0010	Possible nitrate transport system permease protein; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01183. (275 aa)
	CJA_0528	Nitrate ABC transporter permease protein; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01183. (291 aa)
	afuB_2	ABC transporter permease protein; Identified by match to protein family HMM PF00528. (595 aa)
	oppC	Oligopeptide ABC transporter, permease protein; Identified by match to protein family HMM PF00528. (293 aa)
	oppB	Similar to oligopeptide transport system permease protein oppB of Haemophilus influenzae (strain Rd KW20); identified by match to protein family HMM PF00528. (311 aa)
	CJA_2323	AtsB; Identified by match to protein family HMM PF00528. (284 aa)
	atsB	AtsB; Identified by match to protein family HMM PF00528. (266 aa)
	CJA_2290	ABC transporter, permease protein; Identified by match to protein family HMM PF00528. (354 aa)
	CJA_2241	Sulfate ABC transporter, permease protein CysW; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR00969; match to protein family HMM TIGR02140. (298 aa)
	CJA_2242	Sulfate ABC transporter, permease protein CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (299 aa)
	CJA_2251	Binding-protein-dependent transport systems inner membrane component domain protein; Identified by match to protein family HMM PF00528. (410 aa)
	CJA_2252	ABC transporter, permease protein; Identified by match to protein family HMM PF00528. (354 aa)
	CJA_2257	ABC transporter, permease protein; Identified by match to protein family HMM PF00528. (266 aa)
	CJA_2347	Sulfate ABC transporter, permease protein CysW; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR00969; match to protein family HMM TIGR02140. (277 aa)
	modB	Molybdate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (231 aa)
	CJA_3619	Binding-protein-dependent transport systems inner membrane component domain protein; Identified by match to protein family HMM PF00528. (551 aa)
	pstC	Phosphate ABC transporter, permease protein; Identified by match to protein family HMM PF00528. (761 aa)
	pstA	Phosphate ABC transporter, permease protein; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974. (562 aa)
	CJA_2719	ABC transporter, permease protein; Identified by match to protein family HMM PF00528. (272 aa)
	CJA_2348	Sulfate ABC transporter, permease protein CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (282 aa)

Your Current Organism:

Cellvibrio japonicus

NCBI taxonomy Id: 498211
Other names: C. japonicus Ueda107, Cellvibrio japonicus Ueda107, Cellvibrio japonicus str. Ueda107, Cellvibrio japonicus strain Ueda107

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CJA_0010	CJA_0528	CJA_0010	CJA_0528	Possible nitrate transport system permease protein; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01183.	Nitrate ABC transporter permease protein; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01183.	0.909
CJA_0528	CJA_0010	CJA_0528	CJA_0010	Nitrate ABC transporter permease protein; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01183.	Possible nitrate transport system permease protein; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01183.	0.909
CJA_2241	CJA_2242	CJA_2241	CJA_2242	Sulfate ABC transporter, permease protein CysW; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR00969; match to protein family HMM TIGR02140.	Sulfate ABC transporter, permease protein CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	0.994
CJA_2241	CJA_2347	CJA_2241	CJA_2347	Sulfate ABC transporter, permease protein CysW; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR00969; match to protein family HMM TIGR02140.	Sulfate ABC transporter, permease protein CysW; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR00969; match to protein family HMM TIGR02140.	0.904
CJA_2241	CJA_2348	CJA_2241	CJA_2348	Sulfate ABC transporter, permease protein CysW; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR00969; match to protein family HMM TIGR02140.	Sulfate ABC transporter, permease protein CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	0.976
CJA_2242	CJA_2241	CJA_2242	CJA_2241	Sulfate ABC transporter, permease protein CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	Sulfate ABC transporter, permease protein CysW; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR00969; match to protein family HMM TIGR02140.	0.994
CJA_2242	CJA_2347	CJA_2242	CJA_2347	Sulfate ABC transporter, permease protein CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	Sulfate ABC transporter, permease protein CysW; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR00969; match to protein family HMM TIGR02140.	0.975
CJA_2242	CJA_2348	CJA_2242	CJA_2348	Sulfate ABC transporter, permease protein CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	Sulfate ABC transporter, permease protein CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	0.904
CJA_2251	CJA_2252	CJA_2251	CJA_2252	Binding-protein-dependent transport systems inner membrane component domain protein; Identified by match to protein family HMM PF00528.	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.971
CJA_2251	CJA_2290	CJA_2251	CJA_2290	Binding-protein-dependent transport systems inner membrane component domain protein; Identified by match to protein family HMM PF00528.	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.880
CJA_2251	oppB	CJA_2251	CJA_2056	Binding-protein-dependent transport systems inner membrane component domain protein; Identified by match to protein family HMM PF00528.	Similar to oligopeptide transport system permease protein oppB of Haemophilus influenzae (strain Rd KW20); identified by match to protein family HMM PF00528.	0.777
CJA_2252	CJA_2251	CJA_2252	CJA_2251	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	Binding-protein-dependent transport systems inner membrane component domain protein; Identified by match to protein family HMM PF00528.	0.971
CJA_2252	CJA_2290	CJA_2252	CJA_2290	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.901
CJA_2252	oppC	CJA_2252	CJA_2055	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	Oligopeptide ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.760
CJA_2257	CJA_2323	CJA_2257	CJA_2323	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	AtsB; Identified by match to protein family HMM PF00528.	0.430
CJA_2257	CJA_2719	CJA_2257	CJA_2719	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.444
CJA_2257	atsB	CJA_2257	CJA_2321	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	AtsB; Identified by match to protein family HMM PF00528.	0.430
CJA_2290	CJA_2251	CJA_2290	CJA_2251	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	Binding-protein-dependent transport systems inner membrane component domain protein; Identified by match to protein family HMM PF00528.	0.880
CJA_2290	CJA_2252	CJA_2290	CJA_2252	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.901
CJA_2290	oppC	CJA_2290	CJA_2055	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	Oligopeptide ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.757

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