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nrtA nrtA CJA_0010 CJA_0010 nrtC nrtC CJA_0262 CJA_0262 CJA_0274 CJA_0274 modA modA modB modB modC modC msbA msbA CJA_0528 CJA_0528 CJA_0529 CJA_0529 CJA_0542 CJA_0542 CJA_0543 CJA_0543 CJA_0544 CJA_0544 CJA_0545 CJA_0545 natA natA CJA_0604 CJA_0604 CJA_0939 CJA_0939 CJA_0956 CJA_0956 CJA_0957 CJA_0957 fmdF fmdF CJA_0959 CJA_0959 CJA_0960 CJA_0960 CJA_1142 CJA_1142 CJA_1237 CJA_1237 CJA_1238 CJA_1238 CJA_1239 CJA_1239 CJA_1240 CJA_1240 CJA_1241 CJA_1241 CJA_1393 CJA_1393 CJA_1449 CJA_1449 CJA_1450 CJA_1450 CJA_1516 CJA_1516 CJA_1523 CJA_1523 CJA_1574 CJA_1574 afuB_2 afuB_2 CJA_1591 CJA_1591 CJA_1592 CJA_1592 CJA_1609 CJA_1609 CJA_1610 CJA_1610 CJA_1775 CJA_1775 lolD lolD CJA_1777 CJA_1777 pvdE pvdE CJA_2054 CJA_2054 oppC oppC oppB oppB CJA_2057 CJA_2057 CJA_2058 CJA_2058 ccmD ccmD ccmC ccmC ccmB ccmB ccmA ccmA cysA-2 cysA-2 CJA_2241 CJA_2241 CJA_2242 CJA_2242 CJA_2243 CJA_2243 CJA_2247 CJA_2247 CJA_2249 CJA_2249 CJA_2250 CJA_2250 CJA_2251 CJA_2251 CJA_2252 CJA_2252 CJA_2290 CJA_2290 CJA_2291 CJA_2291 atsB atsB CJA_2323 CJA_2323 CJA_2324 CJA_2324 CJA_2343 CJA_2343 CJA_2347 CJA_2347 CJA_2348 CJA_2348 cysP cysP macB macB pstB pstB pstA pstA pstC pstC pstS pstS CJA_2798 CJA_2798 CJA_2804 CJA_2804 CJA_3019 CJA_3019 CJA_3020 CJA_3020 CJA_3021 CJA_3021 CJA_3022 CJA_3022 wzm wzm wzt wzt CJA_3468 CJA_3468 CJA_3480 CJA_3480 znuC znuC znuB znuB ftsX ftsX ftsE ftsE CJA_3604 CJA_3604 CJA_3618 CJA_3618 CJA_3619 CJA_3619 CJA_3620 CJA_3620
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
nrtAABC transporter nitrate-binding protein; Identified by match to protein family HMM TIGR01409. (480 aa)
CJA_0010Possible nitrate transport system permease protein; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01183. (275 aa)
nrtCABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01184. (305 aa)
CJA_0262ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF03412. (680 aa)
CJA_0274Putative toxin secretion ABC transporter, ATP-binding subunit/permease protein; Identified by match to protein family HMM PF00664; match to protein family HMM PF03412. (585 aa)
modAMolybdate ABC transporter, periplasmic molybdate-binding protein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR01256. (269 aa)
modBMolybdate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (231 aa)
modCModC; Identified by match to protein family HMM PF00005. (214 aa)
msbALipid A export permease/ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. (590 aa)
CJA_0528Nitrate ABC transporter permease protein; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01183. (291 aa)
CJA_0529Nitrate-binding protein nrtA precursor, periplasmic; AGR_L_1886p; similar to protein from oscillatoriacean cyanobacterium; identified by match to protein family HMM TIGR01409. (449 aa)
CJA_0542Bmp family protein; Identified by match to protein family HMM PF02608. (355 aa)
CJA_0543ABC transporter, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. (308 aa)
CJA_0544Permease protein of sugar ABC transporter; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. (363 aa)
CJA_0545ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (545 aa)
natASodium ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005. (255 aa)
CJA_0604ABC-2 type transporter; Identified by match to protein family HMM PF01061. (396 aa)
CJA_0939Nitrate transporter system, ATPase component; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01184. (285 aa)
CJA_0956Amide-urea binding protein; Identified by match to protein family HMM PF01094. (398 aa)
CJA_0957Amino acid/sugar ABC transporter, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. (308 aa)
fmdFABC transporter permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. (408 aa)
CJA_0959ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005. (249 aa)
CJA_0960ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005. (229 aa)
CJA_1142Identified by match to protein family HMM PF00691. (576 aa)
CJA_1237Putative branched-chain amino acid transport protein (ABC superfamily, ATP_bind); Identified by match to protein family HMM PF00005. (231 aa)
CJA_1238Branched-chain amino acid ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (270 aa)
CJA_1239Possible permease of ABC transporter; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. (383 aa)
CJA_1240Branched-chain amino acid transport system / permease component domain protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. (584 aa)
CJA_1241ABC transporter, substrate-binding protein. (432 aa)
CJA_1393Toxin secretion ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF03412. (717 aa)
CJA_1449Putative permease, YjgP/YjgQ family superfamily; Identified by match to protein family HMM PF03739. (366 aa)
CJA_1450Putative permease, YjgP/YjgQ family; Identified by match to protein family HMM PF03739. (352 aa)
CJA_1516Putative toxin secretion ABC transporter, ATP-binding subunit/permease protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF03412. (717 aa)
CJA_1523ABC-type multidrug efflux pump; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. (610 aa)
CJA_1574ABC transporter substrate binding protein; Identified by match to protein family HMM PF01547. (303 aa)
afuB_2ABC transporter permease protein; Identified by match to protein family HMM PF00528. (595 aa)
CJA_1591ABC transporter, substrate binding protein; Identified by match to protein family HMM PF01547. (325 aa)
CJA_1592ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005. (378 aa)
CJA_1609ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00806. (254 aa)
CJA_1610ABC-type transport system, permease component; Identified by match to protein family HMM PF02405; match to protein family HMM TIGR00056. (375 aa)
CJA_1775Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687. (434 aa)
lolDInsulin-like growth factor I; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. (233 aa)
CJA_1777Lipoprotein releasing system, permease protein; Identified by match to protein family HMM PF02687; match to protein family HMM TIGR02212. (412 aa)
pvdEPyoverdine ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF00672; match to protein family HMM TIGR01194. (560 aa)
CJA_2054Peptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily. (537 aa)
oppCOligopeptide ABC transporter, permease protein; Identified by match to protein family HMM PF00528. (293 aa)
oppBSimilar to oligopeptide transport system permease protein oppB of Haemophilus influenzae (strain Rd KW20); identified by match to protein family HMM PF00528. (311 aa)
CJA_2057Oligopeptide ABC transporter periplasmic oligopeptide-binding protein. (245 aa)
CJA_2058Oligopeptide ABC transporter periplasmic oligopeptide-binding protein; Identified by match to protein family HMM PF00496. (299 aa)
ccmDHeme exporter protein CcmD; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family. (64 aa)
ccmCHeme exporter protein C; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family. (254 aa)
ccmBHeme exporter protein CcmB; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family. (233 aa)
ccmAHeme ABC exporter, ATP-binding protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. (221 aa)
cysA-2Sulfate/thiosulfate import ATP-binding protein cysA 2; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. (352 aa)
CJA_2241Sulfate ABC transporter, permease protein CysW; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR00969; match to protein family HMM TIGR02140. (298 aa)
CJA_2242Sulfate ABC transporter, permease protein CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (299 aa)
CJA_2243Sulfate ABC transporter, periplasmic binding protein component; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR00971. (334 aa)
CJA_2247Unidentified transporter-ATP binding; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. (589 aa)
CJA_2249Bacterial extracellular solute-binding protein, family 5 domain protein; Identified by match to protein family HMM PF00496. (640 aa)
CJA_2250ABC transporter domain protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily. (540 aa)
CJA_2251Binding-protein-dependent transport systems inner membrane component domain protein; Identified by match to protein family HMM PF00528. (410 aa)
CJA_2252ABC transporter, permease protein; Identified by match to protein family HMM PF00528. (354 aa)
CJA_2290ABC transporter, permease protein; Identified by match to protein family HMM PF00528. (354 aa)
CJA_2291Bacterial extracellular solute-binding protein, family 5 domain protein; Identified by match to protein family HMM PF00496. (586 aa)
atsBAtsB; Identified by match to protein family HMM PF00528. (266 aa)
CJA_2323AtsB; Identified by match to protein family HMM PF00528. (284 aa)
CJA_2324Putative ABC transporter, substrate binding protein. (367 aa)
CJA_2343AtsC; Identified by match to protein family HMM PF00005. (278 aa)
CJA_2347Sulfate ABC transporter, permease protein CysW; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR00969; match to protein family HMM TIGR02140. (277 aa)
CJA_2348Sulfate ABC transporter, permease protein CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (282 aa)
cysPThiosulfate ABC transporter, periplasmic thiosulfate-binding protein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR00971. (337 aa)
macBMacrolide ABC efflux protein; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. (644 aa)
pstBPhosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (270 aa)
pstAPhosphate ABC transporter, permease protein; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974. (562 aa)
pstCPhosphate ABC transporter, permease protein; Identified by match to protein family HMM PF00528. (761 aa)
pstSPhosphate binding protein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR02136. (323 aa)
CJA_2798Toluene tolerance, Ttg2 superfamily; Identified by match to protein family HMM PF05494. (211 aa)
CJA_2804ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (257 aa)
CJA_3019ABC transporter periplasmic binding protein; Identified by match to protein family HMM PF00532. (314 aa)
CJA_3020Sugar ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005. (498 aa)
CJA_3021Sugar ABC transporter permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. (338 aa)
CJA_3022Putative ABC transporter permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. (318 aa)
wzmWzm; Identified by match to protein family HMM PF01061. (257 aa)
wztWzt; Identified by match to protein family HMM PF00005. (234 aa)
CJA_3468Bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547. (412 aa)
CJA_3480High-affinity zinc uptake system protein ZnuA; Identified by match to protein family HMM PF01297. (318 aa)
znuCZinc ABC transporter, ATP-binding protein ZnuC; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family. (266 aa)
znuBPermease of ABC zinc transporter ZnuB; Identified by match to protein family HMM PF00950. (271 aa)
ftsXCell division protein FtsX; Identified by match to protein family HMM PF02687. (366 aa)
ftsECell division ABC transporter, ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. (222 aa)
CJA_3604Putative toxin transporter; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF03412. (779 aa)
CJA_3618ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily. (354 aa)
CJA_3619Binding-protein-dependent transport systems inner membrane component domain protein; Identified by match to protein family HMM PF00528. (551 aa)
CJA_3620Putative Bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547. (347 aa)
Your Current Organism:
Cellvibrio japonicus
NCBI taxonomy Id: 498211
Other names: C. japonicus Ueda107, Cellvibrio japonicus Ueda107, Cellvibrio japonicus str. Ueda107, Cellvibrio japonicus strain Ueda107
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