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VDAG_00992 VDAG_00992 VDAG_01359 VDAG_01359 VDAG_02206 VDAG_02206 VDAG_03545 VDAG_03545 VDAG_09306 VDAG_09306 VDAG_09511 VDAG_09511 VDAG_09820 VDAG_09820
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDAG_00992Naringenin 3-dioxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family. (390 aa)
VDAG_01359Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (312 aa)
VDAG_022062OG-Fe(II) oxygenase family protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (442 aa)
VDAG_03545Flavonol synthase. (370 aa)
VDAG_093062OG-Fe(II) oxygenase. (197 aa)
VDAG_09511Gibberellin 2-beta-dioxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family. (348 aa)
VDAG_09820Thymine dioxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family. (289 aa)
Your Current Organism:
Verticillium dahliae
NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17
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