14 items (Verticillium dahliae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VDAG_01644	Pre-mRNA-splicing factor slt-11. (381 aa)
	VDAG_02645	Pre-mRNA-splicing factor ISY1. (245 aa)
	VDAG_05627	DUF1716 domain-containing protein. (575 aa)
	VDAG_05306	C2H2-type domain-containing protein. (359 aa)
	VDAG_05804	Pre-mRNA-splicing factor cwc15. (246 aa)
	VDAG_05945	Cell cycle control protein cwf14. (148 aa)
	VDAG_06654	Intron-binding protein aquarius. (1267 aa)
	VDAG_08533	Pre-mRNA-processing protein. (536 aa)
	VDAG_08828	Pre-mRNA-splicing factor clf1. (673 aa)
	VDAG_08859	Pre-mRNA-splicing factor prp46. (482 aa)
	VDAG_08924	Peptidyl-prolyl cis-trans isomerase E. (153 aa)
	VDAG_09663	Cell cycle control protein cwf8. (483 aa)
	VDAG_10253	Pre-mRNA-splicing factor cef-1. (780 aa)
	VDAG_10422	Pre-mRNA-splicing factor SYF1. (822 aa)

Your Current Organism:

Verticillium dahliae

NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VDAG_01644	VDAG_02645	G2WVK8	G2WYG3	Pre-mRNA-splicing factor slt-11.	Pre-mRNA-splicing factor ISY1.	0.997
VDAG_01644	VDAG_05306	G2WVK8	G2X5Z0	Pre-mRNA-splicing factor slt-11.	C2H2-type domain-containing protein.	0.946
VDAG_01644	VDAG_05627	G2WVK8	G2X5X2	Pre-mRNA-splicing factor slt-11.	DUF1716 domain-containing protein.	0.602
VDAG_01644	VDAG_05804	G2WVK8	G2X6M2	Pre-mRNA-splicing factor slt-11.	Pre-mRNA-splicing factor cwc15.	0.970
VDAG_01644	VDAG_05945	G2WVK8	G2X713	Pre-mRNA-splicing factor slt-11.	Cell cycle control protein cwf14.	0.999
VDAG_01644	VDAG_06654	G2WVK8	G2X922	Pre-mRNA-splicing factor slt-11.	Intron-binding protein aquarius.	0.997
VDAG_01644	VDAG_08533	G2WVK8	G2XEE8	Pre-mRNA-splicing factor slt-11.	Pre-mRNA-processing protein.	0.999
VDAG_01644	VDAG_08828	G2WVK8	G2XF96	Pre-mRNA-splicing factor slt-11.	Pre-mRNA-splicing factor clf1.	0.999
VDAG_01644	VDAG_08859	G2WVK8	G2XFC7	Pre-mRNA-splicing factor slt-11.	Pre-mRNA-splicing factor prp46.	0.993
VDAG_01644	VDAG_08924	G2WVK8	G2XGD7	Pre-mRNA-splicing factor slt-11.	Peptidyl-prolyl cis-trans isomerase E.	0.990
VDAG_01644	VDAG_09663	G2WVK8	G2XI13	Pre-mRNA-splicing factor slt-11.	Cell cycle control protein cwf8.	0.993
VDAG_01644	VDAG_10253	G2WVK8	G2XJC1	Pre-mRNA-splicing factor slt-11.	Pre-mRNA-splicing factor cef-1.	0.993
VDAG_01644	VDAG_10422	G2WVK8	G2XJU0	Pre-mRNA-splicing factor slt-11.	Pre-mRNA-splicing factor SYF1.	0.999
VDAG_02645	VDAG_01644	G2WYG3	G2WVK8	Pre-mRNA-splicing factor ISY1.	Pre-mRNA-splicing factor slt-11.	0.997
VDAG_02645	VDAG_05306	G2WYG3	G2X5Z0	Pre-mRNA-splicing factor ISY1.	C2H2-type domain-containing protein.	0.953
VDAG_02645	VDAG_05804	G2WYG3	G2X6M2	Pre-mRNA-splicing factor ISY1.	Pre-mRNA-splicing factor cwc15.	0.943
VDAG_02645	VDAG_05945	G2WYG3	G2X713	Pre-mRNA-splicing factor ISY1.	Cell cycle control protein cwf14.	0.999
VDAG_02645	VDAG_06654	G2WYG3	G2X922	Pre-mRNA-splicing factor ISY1.	Intron-binding protein aquarius.	0.991
VDAG_02645	VDAG_08533	G2WYG3	G2XEE8	Pre-mRNA-splicing factor ISY1.	Pre-mRNA-processing protein.	0.995
VDAG_02645	VDAG_08828	G2WYG3	G2XF96	Pre-mRNA-splicing factor ISY1.	Pre-mRNA-splicing factor clf1.	0.999