STRINGSTRING
VDAG_02778 VDAG_02778 VDAG_03244 VDAG_03244 VDAG_05729 VDAG_05729 VDAG_08418 VDAG_08418 VDAG_08466 VDAG_08466
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDAG_02778Pre-mRNA-splicing factor cwc25. (372 aa)
VDAG_03244Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16. (963 aa)
VDAG_05729Pre-mRNA-splicing factor CWC21. (175 aa)
VDAG_08418Cell cycle control protein cwf16. (247 aa)
VDAG_08466Pre-mRNA-splicing factor CWC2. (411 aa)
Your Current Organism:
Verticillium dahliae
NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17
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