5 items (Verticillium dahliae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VDAG_01313	Uncharacterized protein. (144 aa)
	VDAG_06692	Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22. (1487 aa)
	VDAG_08083	XAP5 domain-containing protein. (378 aa)
	VDAG_08927	Sde2_N_Ubi domain-containing protein. (288 aa)
	VDAG_09994	Uncharacterized protein. (208 aa)

Your Current Organism:

Verticillium dahliae

NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VDAG_01313	VDAG_08083	G2WU40	G2XD51	Uncharacterized protein.	XAP5 domain-containing protein.	0.726
VDAG_01313	VDAG_08927	G2WU40	G2XGE0	Uncharacterized protein.	Sde2_N_Ubi domain-containing protein.	0.919
VDAG_01313	VDAG_09994	G2WU40	G2XIL2	Uncharacterized protein.	Uncharacterized protein.	0.935
VDAG_08083	VDAG_01313	G2XD51	G2WU40	XAP5 domain-containing protein.	Uncharacterized protein.	0.726
VDAG_08083	VDAG_08927	G2XD51	G2XGE0	XAP5 domain-containing protein.	Sde2_N_Ubi domain-containing protein.	0.621
VDAG_08083	VDAG_09994	G2XD51	G2XIL2	XAP5 domain-containing protein.	Uncharacterized protein.	0.720
VDAG_08927	VDAG_01313	G2XGE0	G2WU40	Sde2_N_Ubi domain-containing protein.	Uncharacterized protein.	0.919
VDAG_08927	VDAG_08083	G2XGE0	G2XD51	Sde2_N_Ubi domain-containing protein.	XAP5 domain-containing protein.	0.621
VDAG_08927	VDAG_09994	G2XGE0	G2XIL2	Sde2_N_Ubi domain-containing protein.	Uncharacterized protein.	0.909
VDAG_09994	VDAG_01313	G2XIL2	G2WU40	Uncharacterized protein.	Uncharacterized protein.	0.935
VDAG_09994	VDAG_08083	G2XIL2	G2XD51	Uncharacterized protein.	XAP5 domain-containing protein.	0.720
VDAG_09994	VDAG_08927	G2XIL2	G2XGE0	Uncharacterized protein.	Sde2_N_Ubi domain-containing protein.	0.909