STRINGSTRING
VDAG_00760 VDAG_00760 VDAG_01971 VDAG_01971 VDAG_02878 VDAG_02878 VDAG_03123 VDAG_03123 VDAG_04370 VDAG_04370 VDAG_04652 VDAG_04652 VDAG_05301 VDAG_05301 VDAG_08765 VDAG_08765 VDAG_08777 VDAG_08777 VDAG_09083 VDAG_09083 VDAG_08873 VDAG_08873
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDAG_00760PWI domain-containing protein. (687 aa)
VDAG_01971Branchpoint-bridging protein. (327 aa)
VDAG_02878RNA-binding post-transcriptional regulator csx1. (418 aa)
VDAG_03123Pre-mRNA-processing factor 39. (576 aa)
VDAG_04370RRM domain-containing protein. (440 aa)
VDAG_04652Branchpoint-bridging protein. (590 aa)
VDAG_05301LUC7 protein. (271 aa)
VDAG_08765Uncharacterized protein. (148 aa)
VDAG_08777Pre-mRNA-processing protein prp40. (839 aa)
VDAG_09083Uncharacterized protein. (250 aa)
VDAG_08873IDC1 protein. (1580 aa)
Your Current Organism:
Verticillium dahliae
NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17
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