STRINGSTRING
VDAG_00613 VDAG_00613 VDAG_01780 VDAG_01780 VDAG_03152 VDAG_03152 VDAG_03173 VDAG_03173 VDAG_04465 VDAG_04465 VDAG_04215 VDAG_04215 VDAG_05874 VDAG_05874 VDAG_06655 VDAG_06655 VDAG_08432 VDAG_08432 VDAG_08700 VDAG_08700 VDAG_08833 VDAG_08833 VDAG_08864 VDAG_08864
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDAG_00613THO complex subunit 2. (2374 aa)
VDAG_01780ATP-dependent RNA helicase SUB2. (513 aa)
VDAG_03152mRNA export factor mex67. (649 aa)
VDAG_03173Uncharacterized protein. (213 aa)
VDAG_04465C2H2-type domain-containing protein. (891 aa)
VDAG_04215RNA binding domain-containing protein. (329 aa)
VDAG_05874Nuclear cap-binding protein subunit 2. (186 aa)
VDAG_06655THO complex subunit 1. (858 aa)
VDAG_08432Cap binding protein. (795 aa)
VDAG_08700Uncharacterized protein. (357 aa)
VDAG_08833THO complex subunit 3. (339 aa)
VDAG_08864RRM domain-containing protein. (256 aa)
Your Current Organism:
Verticillium dahliae
NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17
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